Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC18.94■□□□□ 0.62
CMC4P56277 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CMC4P56277 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CMC4P56277 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.93■□□□□ 0.62
CMC4P56277 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.93■□□□□ 0.62
CMC4P56277 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CMC4P56277 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CMC4P56277 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CMC4P56277 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CMC4P56277 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CMC4P56277 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CMC4P56277 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CMC4P56277 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CMC4P56277 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CMC4P56277 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CMC4P56277 CR559946.2-201ENST00000623684 991 ntBASIC18.91■□□□□ 0.62
CMC4P56277 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CMC4P56277 AP002414.2-202ENST00000590929 1450 ntBASIC18.9■□□□□ 0.62
CMC4P56277 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CMC4P56277 AC016575.1-201ENST00000607026 382 ntBASIC18.9■□□□□ 0.62
CMC4P56277 ABCB10P3-201ENST00000561950 2166 ntBASIC18.9■□□□□ 0.62
CMC4P56277 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CMC4P56277 AC100797.4-201ENST00000631653 1827 ntBASIC18.9■□□□□ 0.62
CMC4P56277 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CMC4P56277 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CMC4P56277 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CMC4P56277 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CMC4P56277 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.89■□□□□ 0.61
CMC4P56277 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CMC4P56277 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CMC4P56277 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CMC4P56277 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC18.88■□□□□ 0.61
CMC4P56277 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC18.88■□□□□ 0.61
CMC4P56277 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CMC4P56277 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CMC4P56277 MIR639-201ENST00000384974 98 ntBASIC18.88■□□□□ 0.61
CMC4P56277 HLA-V-202ENST00000446817 847 ntBASIC18.88■□□□□ 0.61
CMC4P56277 PROC-203ENST00000409048 1586 ntTSL 5 BASIC18.88■□□□□ 0.61
CMC4P56277 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC18.88■□□□□ 0.61
CMC4P56277 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CMC4P56277 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CMC4P56277 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CMC4P56277 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CMC4P56277 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.87■□□□□ 0.61
CMC4P56277 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC18.86■□□□□ 0.61
CMC4P56277 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CMC4P56277 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CMC4P56277 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.86■□□□□ 0.61
CMC4P56277 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.86■□□□□ 0.61
CMC4P56277 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CMC4P56277 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CMC4P56277 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CMC4P56277 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.85■□□□□ 0.61
CMC4P56277 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CMC4P56277 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CMC4P56277 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CMC4P56277 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CMC4P56277 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CMC4P56277 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CMC4P56277 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CMC4P56277 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CMC4P56277 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CMC4P56277 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CMC4P56277 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.82■□□□□ 0.6
CMC4P56277 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CMC4P56277 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CMC4P56277 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC18.82■□□□□ 0.6
CMC4P56277 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CMC4P56277 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CMC4P56277 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CMC4P56277 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CMC4P56277 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.8■□□□□ 0.6
CMC4P56277 AC148477.6-201ENST00000623746 465 ntBASIC18.8■□□□□ 0.6
CMC4P56277 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC18.8■□□□□ 0.6
CMC4P56277 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CMC4P56277 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CMC4P56277 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CMC4P56277 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CMC4P56277 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CMC4P56277 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.79■□□□□ 0.6
CMC4P56277 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
CMC4P56277 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CMC4P56277 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.79■□□□□ 0.6
CMC4P56277 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CMC4P56277 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CMC4P56277 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CMC4P56277 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CMC4P56277 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CMC4P56277 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CMC4P56277 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CMC4P56277 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CMC4P56277 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CMC4P56277 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CMC4P56277 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CMC4P56277 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.77■□□□□ 0.6
CMC4P56277 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.77■□□□□ 0.6
CMC4P56277 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CMC4P56277 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.76■□□□□ 0.59
CMC4P56277 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CMC4P56277 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms