Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
HMGCS2P54868 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
HMGCS2P54868 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC29.79■■■□□ 2.36
HMGCS2P54868 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC29.79■■■□□ 2.36
HMGCS2P54868 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
HMGCS2P54868 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
HMGCS2P54868 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC29.78■■■□□ 2.36
HMGCS2P54868 MEST-211ENST00000437945 1455 ntTSL 5 BASIC29.78■■■□□ 2.36
HMGCS2P54868 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
HMGCS2P54868 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
HMGCS2P54868 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
HMGCS2P54868 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
HMGCS2P54868 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
HMGCS2P54868 U85056.1-201ENST00000616429 682 ntBASIC29.77■■■□□ 2.36
HMGCS2P54868 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
HMGCS2P54868 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC29.77■■■□□ 2.36
HMGCS2P54868 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
HMGCS2P54868 HYI-213ENST00000583037 1322 ntTSL 5 BASIC29.76■■■□□ 2.36
HMGCS2P54868 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC29.76■■■□□ 2.35
HMGCS2P54868 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC29.75■■■□□ 2.35
HMGCS2P54868 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
HMGCS2P54868 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC29.74■■■□□ 2.35
HMGCS2P54868 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
HMGCS2P54868 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
HMGCS2P54868 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC29.72■■■□□ 2.35
HMGCS2P54868 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
HMGCS2P54868 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
HMGCS2P54868 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
HMGCS2P54868 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC29.72■■■□□ 2.35
HMGCS2P54868 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
HMGCS2P54868 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
HMGCS2P54868 AL033527.3-201ENST00000566366 1196 ntBASIC29.71■■■□□ 2.35
HMGCS2P54868 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC29.71■■■□□ 2.35
HMGCS2P54868 AC092296.2-201ENST00000589470 999 ntBASIC29.71■■■□□ 2.35
HMGCS2P54868 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
HMGCS2P54868 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
HMGCS2P54868 AC018358.1-201ENST00000631079 1402 ntBASIC29.71■■■□□ 2.35
HMGCS2P54868 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC29.7■■■□□ 2.35
HMGCS2P54868 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
HMGCS2P54868 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC29.7■■■□□ 2.35
HMGCS2P54868 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
HMGCS2P54868 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
HMGCS2P54868 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC29.7■■■□□ 2.34
HMGCS2P54868 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
HMGCS2P54868 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
HMGCS2P54868 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
HMGCS2P54868 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC29.69■■■□□ 2.34
HMGCS2P54868 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC29.68■■■□□ 2.34
HMGCS2P54868 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC29.68■■■□□ 2.34
HMGCS2P54868 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
HMGCS2P54868 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
HMGCS2P54868 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
HMGCS2P54868 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
HMGCS2P54868 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
HMGCS2P54868 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
HMGCS2P54868 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
HMGCS2P54868 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
HMGCS2P54868 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
HMGCS2P54868 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
HMGCS2P54868 MED25-210ENST00000612854 801 ntTSL 5 BASIC29.64■■■□□ 2.34
HMGCS2P54868 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
HMGCS2P54868 MED25-214ENST00000622402 642 ntTSL 5 BASIC29.64■■■□□ 2.34
HMGCS2P54868 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
HMGCS2P54868 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC29.63■■■□□ 2.33
HMGCS2P54868 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
HMGCS2P54868 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
HMGCS2P54868 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
HMGCS2P54868 ECEL1P2-201ENST00000461596 1295 ntBASIC29.61■■■□□ 2.33
HMGCS2P54868 KRT18P60-201ENST00000312876 1297 ntBASIC29.6■■■□□ 2.33
HMGCS2P54868 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
HMGCS2P54868 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC29.6■■■□□ 2.33
HMGCS2P54868 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC29.59■■■□□ 2.33
HMGCS2P54868 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
HMGCS2P54868 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
HMGCS2P54868 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC29.59■■■□□ 2.33
HMGCS2P54868 ST7-AS1-201ENST00000456775 1889 ntBASIC29.59■■■□□ 2.33
HMGCS2P54868 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
HMGCS2P54868 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC29.58■■■□□ 2.33
HMGCS2P54868 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC29.57■■■□□ 2.32
HMGCS2P54868 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
HMGCS2P54868 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC29.57■■■□□ 2.32
HMGCS2P54868 AC126177.7-201ENST00000547904 679 ntBASIC29.57■■■□□ 2.32
HMGCS2P54868 MOB2-207ENST00000614710 705 ntTSL 5 BASIC29.56■■■□□ 2.32
HMGCS2P54868 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
HMGCS2P54868 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
HMGCS2P54868 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
HMGCS2P54868 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC29.55■■■□□ 2.32
HMGCS2P54868 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC29.55■■■□□ 2.32
HMGCS2P54868 GFER-205ENST00000569451 517 ntTSL 5 BASIC29.54■■■□□ 2.32
HMGCS2P54868 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
HMGCS2P54868 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
HMGCS2P54868 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
HMGCS2P54868 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC29.53■■■□□ 2.32
HMGCS2P54868 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC29.53■■■□□ 2.32
HMGCS2P54868 TSPY13P-201ENST00000338964 914 ntBASIC29.53■■■□□ 2.32
HMGCS2P54868 AC004987.1-201ENST00000428627 508 ntBASIC29.53■■■□□ 2.32
HMGCS2P54868 AL157400.5-201ENST00000507624 621 ntBASIC29.53■■■□□ 2.32
HMGCS2P54868 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC29.53■■■□□ 2.32
HMGCS2P54868 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC29.53■■■□□ 2.32
HMGCS2P54868 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms