Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
HTR3AP46098 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HTR3AP46098 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
HTR3AP46098 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
HTR3AP46098 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
HTR3AP46098 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HTR3AP46098 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
HTR3AP46098 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.26■■□□□ 1.31
HTR3AP46098 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
HTR3AP46098 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
HTR3AP46098 AC021231.2-201ENST00000594613 730 ntBASIC23.25■■□□□ 1.31
HTR3AP46098 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.25■■□□□ 1.31
HTR3AP46098 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HTR3AP46098 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
HTR3AP46098 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.24■■□□□ 1.31
HTR3AP46098 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HTR3AP46098 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HTR3AP46098 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
HTR3AP46098 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HTR3AP46098 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
HTR3AP46098 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HTR3AP46098 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.23■■□□□ 1.31
HTR3AP46098 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.22■■□□□ 1.31
HTR3AP46098 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.22■■□□□ 1.31
HTR3AP46098 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HTR3AP46098 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
HTR3AP46098 AL121749.1-202ENST00000609313 2153 ntBASIC23.22■■□□□ 1.31
HTR3AP46098 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.22■■□□□ 1.31
HTR3AP46098 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
HTR3AP46098 WHAMMP2-203ENST00000563942 1603 ntBASIC23.22■■□□□ 1.31
HTR3AP46098 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
HTR3AP46098 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
HTR3AP46098 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HTR3AP46098 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.21■■□□□ 1.31
HTR3AP46098 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HTR3AP46098 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
HTR3AP46098 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
HTR3AP46098 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HTR3AP46098 DRD5P2-201ENST00000421395 2012 ntBASIC23.2■■□□□ 1.3
HTR3AP46098 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HTR3AP46098 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HTR3AP46098 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.2■■□□□ 1.3
HTR3AP46098 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HTR3AP46098 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HTR3AP46098 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.2■■□□□ 1.3
HTR3AP46098 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HTR3AP46098 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HTR3AP46098 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HTR3AP46098 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HTR3AP46098 AC100797.4-201ENST00000631653 1827 ntBASIC23.19■■□□□ 1.3
HTR3AP46098 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HTR3AP46098 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.19■■□□□ 1.3
HTR3AP46098 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HTR3AP46098 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HTR3AP46098 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.18■■□□□ 1.3
HTR3AP46098 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.18■■□□□ 1.3
HTR3AP46098 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.18■■□□□ 1.3
HTR3AP46098 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.18■■□□□ 1.3
HTR3AP46098 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.18■■□□□ 1.3
HTR3AP46098 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.17■■□□□ 1.3
HTR3AP46098 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
HTR3AP46098 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.17■■□□□ 1.3
HTR3AP46098 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HTR3AP46098 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HTR3AP46098 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.16■■□□□ 1.3
HTR3AP46098 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HTR3AP46098 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.15■■□□□ 1.3
HTR3AP46098 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
HTR3AP46098 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
HTR3AP46098 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
HTR3AP46098 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
HTR3AP46098 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
HTR3AP46098 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
HTR3AP46098 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HTR3AP46098 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
HTR3AP46098 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.12■■□□□ 1.29
HTR3AP46098 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.12■■□□□ 1.29
HTR3AP46098 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HTR3AP46098 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
HTR3AP46098 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
HTR3AP46098 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HTR3AP46098 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HTR3AP46098 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HTR3AP46098 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HTR3AP46098 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
HTR3AP46098 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HTR3AP46098 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HTR3AP46098 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
HTR3AP46098 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
HTR3AP46098 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.11■■□□□ 1.29
HTR3AP46098 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.11■■□□□ 1.29
HTR3AP46098 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HTR3AP46098 AP002414.2-202ENST00000590929 1450 ntBASIC23.1■■□□□ 1.29
HTR3AP46098 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HTR3AP46098 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
HTR3AP46098 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
HTR3AP46098 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
HTR3AP46098 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.09■■□□□ 1.29
HTR3AP46098 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
HTR3AP46098 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms