Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 YBR226CYBR226C 411 nt6.25□□□□□ -1.41
CDC40P40968 TOS2YGR221C 1869 nt6.25□□□□□ -1.41
CDC40P40968 YOR389WYOR389W 1875 nt6.25□□□□□ -1.41
CDC40P40968 SRP54YPR088C 1626 nt6.25□□□□□ -1.41
CDC40P40968 TPO1YLL028W 1761 nt6.24□□□□□ -1.41
CDC40P40968 GNA1YFL017C 480 nt6.24□□□□□ -1.41
CDC40P40968 YJR149WYJR149W 1215 nt6.24□□□□□ -1.41
CDC40P40968 TAF13YML098W 504 nt6.24□□□□□ -1.41
CDC40P40968 ABZ2YMR289W 1125 nt6.24□□□□□ -1.41
CDC40P40968 RFS1YBR052C 633 nt6.24□□□□□ -1.41
CDC40P40968 DIP5YPL265W 1827 nt6.24□□□□□ -1.41
CDC40P40968 PEX28YHR150W 1740 nt6.24□□□□□ -1.41
CDC40P40968 CDC16YKL022C 2523 nt6.24□□□□□ -1.41
CDC40P40968 DAL4YIR028W 1908 nt6.23□□□□□ -1.41
CDC40P40968 AVL9YLR114C 2295 nt6.23□□□□□ -1.41
CDC40P40968 JIP4YDR475C 2631 nt6.23□□□□□ -1.41
CDC40P40968 ADH7YCR105W 1086 nt6.23□□□□□ -1.41
CDC40P40968 TRR1YDR353W 960 nt6.23□□□□□ -1.41
CDC40P40968 RRP46YGR095C 672 nt6.23□□□□□ -1.41
CDC40P40968 POX1YGL205W 2247 nt6.23□□□□□ -1.41
CDC40P40968 FET4YMR319C 1659 nt6.23□□□□□ -1.41
CDC40P40968 ENO2YHR174W 1314 nt6.23□□□□□ -1.41
CDC40P40968 YER152W-AYER152W-A 567 nt6.22□□□□□ -1.41
CDC40P40968 SNA3YJL151C 402 nt6.22□□□□□ -1.41
CDC40P40968 EDC3YEL015W 1656 nt6.22□□□□□ -1.41
CDC40P40968 ICL2YPR006C 1728 nt6.22□□□□□ -1.41
CDC40P40968 SSC1YJR045C 1965 nt6.21□□□□□ -1.42
CDC40P40968 POT1YIL160C 1254 nt6.21□□□□□ -1.42
CDC40P40968 BUB2YMR055C 921 nt6.21□□□□□ -1.42
CDC40P40968 MRP7YNL005C 1116 nt6.21□□□□□ -1.42
CDC40P40968 RAD51YER095W 1203 nt6.2□□□□□ -1.42
CDC40P40968 PAU15YIR041W 375 nt6.2□□□□□ -1.42
CDC40P40968 PPZ2YDR436W 2133 nt6.19□□□□□ -1.42
CDC40P40968 MAK32YCR019W 1092 nt6.19□□□□□ -1.42
CDC40P40968 STP3YLR375W 1032 nt6.19□□□□□ -1.42
CDC40P40968 YNL017CYNL017C 339 nt6.19□□□□□ -1.42
CDC40P40968 CDC23YHR166C 1881 nt6.19□□□□□ -1.42
CDC40P40968 SRF1YDL133W 1314 nt6.19□□□□□ -1.42
CDC40P40968 YBL113CYBL113C 2379 nt6.18□□□□□ -1.42
CDC40P40968 ELP6YMR312W 822 nt6.18□□□□□ -1.42
CDC40P40968 NSE5YML023C 1671 nt6.17□□□□□ -1.42
CDC40P40968 ARO3YDR035W 1113 nt6.17□□□□□ -1.42
CDC40P40968 GSF2YML048W 1212 nt6.17□□□□□ -1.42
CDC40P40968 ALG7YBR243C 1347 nt6.17□□□□□ -1.42
CDC40P40968 SNU71YGR013W 1863 nt6.16□□□□□ -1.42
CDC40P40968 RCF2YNR018W 675 nt6.16□□□□□ -1.42
CDC40P40968 ATP4YPL078C 735 nt6.16□□□□□ -1.42
CDC40P40968 LEU2YCL018W 1095 nt6.16□□□□□ -1.42
CDC40P40968 SGE1YPR198W 1632 nt6.16□□□□□ -1.42
CDC40P40968 NAM8YHR086W 1572 nt6.15□□□□□ -1.42
CDC40P40968 TPC1YGR096W 945 nt6.15□□□□□ -1.42
CDC40P40968 YIR035CYIR035C 765 nt6.15□□□□□ -1.42
CDC40P40968 GTS1YGL181W 1191 nt6.14□□□□□ -1.43
CDC40P40968 YPL277CYPL277C 1464 nt6.14□□□□□ -1.43
CDC40P40968 DCR2YLR361C 1737 nt6.13□□□□□ -1.43
CDC40P40968 tS(GCU)LtS(GCU)L 80 nt6.13□□□□□ -1.43
CDC40P40968 REX2YLR059C 810 nt6.13□□□□□ -1.43
CDC40P40968 EHT1YBR177C 1356 nt6.13□□□□□ -1.43
CDC40P40968 MTC6YHR151C 1581 nt6.13□□□□□ -1.43
CDC40P40968 MPA43YNL249C 1629 nt6.13□□□□□ -1.43
CDC40P40968 FLC2YAL053W 2352 nt6.13□□□□□ -1.43
CDC40P40968 TES1YJR019C 1050 nt6.12□□□□□ -1.43
CDC40P40968 NAP1YKR048C 1254 nt6.12□□□□□ -1.43
CDC40P40968 YLL058WYLL058W 1728 nt6.12□□□□□ -1.43
CDC40P40968 CDA1YLR307W 906 nt6.12□□□□□ -1.43
CDC40P40968 ENB1YOL158C 1821 nt6.12□□□□□ -1.43
CDC40P40968 MKK1YOR231W 1527 nt6.12□□□□□ -1.43
CDC40P40968 YBR232CYBR232C 360 nt6.12□□□□□ -1.43
CDC40P40968 ACO1YLR304C 2337 nt6.11□□□□□ -1.43
CDC40P40968 CAN1YEL063C 1773 nt6.11□□□□□ -1.43
CDC40P40968 GYP8YFL027C 1494 nt6.11□□□□□ -1.43
CDC40P40968 TUB4YLR212C 1422 nt6.11□□□□□ -1.43
CDC40P40968 LEO1YOR123C 1395 nt6.11□□□□□ -1.43
CDC40P40968 FAF1YIL019W 1041 nt6.11□□□□□ -1.43
CDC40P40968 HRA1HRA1 564 nt6.11□□□□□ -1.43
CDC40P40968 YJL043WYJL043W 774 nt6.11□□□□□ -1.43
CDC40P40968 ATF1YOR377W 1578 nt6.1□□□□□ -1.43
CDC40P40968 MEU1YLR017W 1014 nt6.1□□□□□ -1.43
CDC40P40968 YPT11YNL304W 1254 nt6.1□□□□□ -1.43
CDC40P40968 WSC3YOL105C 1671 nt6.1□□□□□ -1.43
CDC40P40968 RQC1YDR333C 2172 nt6.1□□□□□ -1.43
CDC40P40968 NIF3YGL221C 867 nt6.09□□□□□ -1.43
CDC40P40968 FZF1YGL254W 900 nt6.09□□□□□ -1.43
CDC40P40968 BUD9YGR041W 1644 nt6.09□□□□□ -1.43
CDC40P40968 VTS1YOR359W 1572 nt6.09□□□□□ -1.43
CDC40P40968 AGP2YBR132C 1791 nt6.08□□□□□ -1.44
CDC40P40968 SEC23YPR181C 2307 nt6.08□□□□□ -1.44
CDC40P40968 KRE1YNL322C 942 nt6.08□□□□□ -1.44
CDC40P40968 PGC1YPL206C 966 nt6.08□□□□□ -1.44
CDC40P40968 GDA1YEL042W 1557 nt6.08□□□□□ -1.44
CDC40P40968 CHS5YLR330W 2016 nt6.08□□□□□ -1.44
CDC40P40968 TCB1YOR086C 3561 nt6.07□□□□□ -1.44
CDC40P40968 RCF1YML030W 480 nt6.07□□□□□ -1.44
CDC40P40968 SPE2YOL052C 1191 nt6.07□□□□□ -1.44
CDC40P40968 YOR012WYOR012W 414 nt6.07□□□□□ -1.44
CDC40P40968 EFM1YHL039W 1758 nt6.07□□□□□ -1.44
CDC40P40968 KIN1YDR122W 3195 nt6.06□□□□□ -1.44
CDC40P40968 FRE5YOR384W 2085 nt6.05□□□□□ -1.44
CDC40P40968 HNM1YGL077C 1692 nt6.05□□□□□ -1.44
CDC40P40968 HHY1YEL059W 309 nt6.05□□□□□ -1.44
Retrieved 100 of 7,029 protein–RNA pairs in 77.1 ms