Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CHRNA5P30532 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC32.02■■■□□ 2.72
CHRNA5P30532 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CHRNA5P30532 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CHRNA5P30532 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CHRNA5P30532 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CHRNA5P30532 ECEL1P2-201ENST00000461596 1295 ntBASIC32.02■■■□□ 2.72
CHRNA5P30532 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CHRNA5P30532 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC32.01■■■□□ 2.71
CHRNA5P30532 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
CHRNA5P30532 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC32■■■□□ 2.71
CHRNA5P30532 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CHRNA5P30532 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC31.99■■■□□ 2.71
CHRNA5P30532 RPS2-210ENST00000530225 765 ntTSL 2 BASIC31.99■■■□□ 2.71
CHRNA5P30532 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC31.99■■■□□ 2.71
CHRNA5P30532 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
CHRNA5P30532 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.98■■■□□ 2.71
CHRNA5P30532 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
CHRNA5P30532 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CHRNA5P30532 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC31.97■■■□□ 2.71
CHRNA5P30532 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CHRNA5P30532 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
CHRNA5P30532 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC31.96■■■□□ 2.71
CHRNA5P30532 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.71
CHRNA5P30532 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
CHRNA5P30532 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CHRNA5P30532 DUX4L18-201ENST00000553347 1267 ntBASIC31.94■■■□□ 2.7
CHRNA5P30532 MOB2-207ENST00000614710 705 ntTSL 5 BASIC31.93■■■□□ 2.7
CHRNA5P30532 AC129492.7-201ENST00000622992 756 ntBASIC31.93■■■□□ 2.7
CHRNA5P30532 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.92■■■□□ 2.7
CHRNA5P30532 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CHRNA5P30532 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CHRNA5P30532 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CHRNA5P30532 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
CHRNA5P30532 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CHRNA5P30532 MED25-210ENST00000612854 801 ntTSL 5 BASIC31.91■■■□□ 2.7
CHRNA5P30532 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CHRNA5P30532 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC31.91■■■□□ 2.7
CHRNA5P30532 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC31.91■■■□□ 2.7
CHRNA5P30532 MED25-214ENST00000622402 642 ntTSL 5 BASIC31.91■■■□□ 2.7
CHRNA5P30532 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC31.9■■■□□ 2.7
CHRNA5P30532 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC31.9■■■□□ 2.7
CHRNA5P30532 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.9■■■□□ 2.7
CHRNA5P30532 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.9■■■□□ 2.7
CHRNA5P30532 AL035685.1-201ENST00000636663 812 ntBASIC31.9■■■□□ 2.7
CHRNA5P30532 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
CHRNA5P30532 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
CHRNA5P30532 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
CHRNA5P30532 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CHRNA5P30532 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CHRNA5P30532 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
CHRNA5P30532 AL451085.2-201ENST00000605085 799 ntBASIC31.87■■■□□ 2.69
CHRNA5P30532 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.86■■■□□ 2.69
CHRNA5P30532 AL157400.5-201ENST00000507624 621 ntBASIC31.86■■■□□ 2.69
CHRNA5P30532 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CHRNA5P30532 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CHRNA5P30532 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CHRNA5P30532 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CHRNA5P30532 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC31.85■■■□□ 2.69
CHRNA5P30532 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC31.84■■■□□ 2.69
CHRNA5P30532 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CHRNA5P30532 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC31.84■■■□□ 2.69
CHRNA5P30532 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
CHRNA5P30532 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.83■■■□□ 2.69
CHRNA5P30532 AL592293.1-201ENST00000502889 1188 ntBASIC31.83■■■□□ 2.69
CHRNA5P30532 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
CHRNA5P30532 AL592295.1-201ENST00000400984 884 ntBASIC31.79■■■□□ 2.68
CHRNA5P30532 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CHRNA5P30532 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CHRNA5P30532 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.79■■■□□ 2.68
CHRNA5P30532 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CHRNA5P30532 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CHRNA5P30532 AC009831.1-201ENST00000580420 1582 ntBASIC31.79■■■□□ 2.68
CHRNA5P30532 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CHRNA5P30532 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CHRNA5P30532 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
CHRNA5P30532 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CHRNA5P30532 AC007029.1-201ENST00000604183 313 ntBASIC31.78■■■□□ 2.68
CHRNA5P30532 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
CHRNA5P30532 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CHRNA5P30532 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
CHRNA5P30532 AC126177.7-201ENST00000547904 679 ntBASIC31.76■■■□□ 2.67
CHRNA5P30532 TRIR-205ENST00000592273 783 ntTSL 3 BASIC31.76■■■□□ 2.67
CHRNA5P30532 AC133552.2-201ENST00000619106 1032 ntBASIC31.76■■■□□ 2.67
CHRNA5P30532 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
CHRNA5P30532 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
CHRNA5P30532 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
CHRNA5P30532 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC31.75■■■□□ 2.67
CHRNA5P30532 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC31.75■■■□□ 2.67
CHRNA5P30532 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.75■■■□□ 2.67
CHRNA5P30532 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.73■■■□□ 2.67
CHRNA5P30532 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
CHRNA5P30532 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CHRNA5P30532 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CHRNA5P30532 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
CHRNA5P30532 MTURN-203ENST00000409688 843 ntTSL 2 BASIC31.71■■■□□ 2.67
CHRNA5P30532 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
CHRNA5P30532 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC31.71■■■□□ 2.67
CHRNA5P30532 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CHRNA5P30532 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms