Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 CYC3YAL039C 810 nt8.24□□□□□ -1.09
MSH1P25846 YKR012CYKR012C 378 nt8.24□□□□□ -1.09
MSH1P25846 CDD1YLR245C 429 nt8.24□□□□□ -1.09
MSH1P25846 NSG2YNL156C 900 nt8.24□□□□□ -1.09
MSH1P25846 YIA6YIL006W 1122 nt8.23□□□□□ -1.09
MSH1P25846 YBL111CYBL111C 2004 nt8.23□□□□□ -1.09
MSH1P25846 GNA1YFL017C 480 nt8.22□□□□□ -1.09
MSH1P25846 RIB1YBL033C 1038 nt8.22□□□□□ -1.09
MSH1P25846 ADH3YMR083W 1128 nt8.22□□□□□ -1.09
MSH1P25846 PHB2YGR231C 933 nt8.21□□□□□ -1.1
MSH1P25846 SNP1YIL061C 903 nt8.21□□□□□ -1.1
MSH1P25846 TES1YJR019C 1050 nt8.21□□□□□ -1.1
MSH1P25846 TOD6YBL054W 1578 nt8.21□□□□□ -1.1
MSH1P25846 RTG2YGL252C 1767 nt8.2□□□□□ -1.1
MSH1P25846 RSM7YJR113C 744 nt8.2□□□□□ -1.1
MSH1P25846 CDA1YLR307W 906 nt8.2□□□□□ -1.1
MSH1P25846 ENO1YGR254W 1314 nt8.2□□□□□ -1.1
MSH1P25846 MLS1YNL117W 1665 nt8.2□□□□□ -1.1
MSH1P25846 LEO1YOR123C 1395 nt8.2□□□□□ -1.1
MSH1P25846 WSC3YOL105C 1671 nt8.19□□□□□ -1.1
MSH1P25846 RCF2YNR018W 675 nt8.19□□□□□ -1.1
MSH1P25846 HXT13YEL069C 1695 nt8.18□□□□□ -1.1
MSH1P25846 DCR2YLR361C 1737 nt8.18□□□□□ -1.1
MSH1P25846 GCD11YER025W 1584 nt8.18□□□□□ -1.1
MSH1P25846 YER152W-AYER152W-A 567 nt8.17□□□□□ -1.1
MSH1P25846 YNR001W-AYNR001W-A 219 nt8.17□□□□□ -1.1
MSH1P25846 VBA3YCL069W 1377 nt8.17□□□□□ -1.1
MSH1P25846 SDS24YBR214W 1584 nt8.17□□□□□ -1.1
MSH1P25846 PPS1YBR276C 2424 nt8.17□□□□□ -1.1
MSH1P25846 SOD2YHR008C 702 nt8.16□□□□□ -1.1
MSH1P25846 SRP102YKL154W 735 nt8.16□□□□□ -1.1
MSH1P25846 RCF1YML030W 480 nt8.16□□□□□ -1.1
MSH1P25846 RNA170RNA170 169 nt8.16□□□□□ -1.1
MSH1P25846 RCR1YBR005W 642 nt8.16□□□□□ -1.1
MSH1P25846 RFS1YBR052C 633 nt8.16□□□□□ -1.1
MSH1P25846 CBK1YNL161W 2271 nt8.15□□□□□ -1.1
MSH1P25846 FCP1YMR277W 2199 nt8.15□□□□□ -1.1
MSH1P25846 HTS1YPR033C 1641 nt8.15□□□□□ -1.1
MSH1P25846 YGR068W-AYGR068W-A 96 nt8.15□□□□□ -1.1
MSH1P25846 SER2YGR208W 930 nt8.15□□□□□ -1.1
MSH1P25846 YMR007WYMR007W 381 nt8.15□□□□□ -1.1
MSH1P25846 CCR4YAL021C 2514 nt8.15□□□□□ -1.1
MSH1P25846 CDC23YHR166C 1881 nt8.15□□□□□ -1.11
MSH1P25846 APT1YML022W 564 nt8.14□□□□□ -1.11
MSH1P25846 MSB3YNL293W 1902 nt8.13□□□□□ -1.11
MSH1P25846 YGR137WYGR137W 375 nt8.13□□□□□ -1.11
MSH1P25846 VPS65YLR322W 315 nt8.12□□□□□ -1.11
MSH1P25846 SNU66YOR308C 1764 nt8.12□□□□□ -1.11
MSH1P25846 YJL043WYJL043W 774 nt8.11□□□□□ -1.11
MSH1P25846 HAM1YJR069C 594 nt8.11□□□□□ -1.11
MSH1P25846 HNM1YGL077C 1692 nt8.11□□□□□ -1.11
MSH1P25846 HXT8YJL214W 1710 nt8.1□□□□□ -1.11
MSH1P25846 CDC13YDL220C 2775 nt8.1□□□□□ -1.11
MSH1P25846 SWM1YDR260C 513 nt8.1□□□□□ -1.11
MSH1P25846 YLR280CYLR280C 351 nt8.1□□□□□ -1.11
MSH1P25846 SHC1YER096W 1539 nt8.09□□□□□ -1.11
MSH1P25846 YFR020WYFR020W 699 nt8.09□□□□□ -1.11
MSH1P25846 MGM101YJR144W 810 nt8.09□□□□□ -1.11
MSH1P25846 AOS1YPR180W 1044 nt8.09□□□□□ -1.11
MSH1P25846 ERO1YML130C 1692 nt8.08□□□□□ -1.12
MSH1P25846 FLC2YAL053W 2352 nt8.08□□□□□ -1.12
MSH1P25846 GTS1YGL181W 1191 nt8.07□□□□□ -1.12
MSH1P25846 MET22YOL064C 1074 nt8.07□□□□□ -1.12
MSH1P25846 YOR389WYOR389W 1875 nt8.06□□□□□ -1.12
MSH1P25846 SRF1YDL133W 1314 nt8.06□□□□□ -1.12
MSH1P25846 COG1YGL223C 1254 nt8.06□□□□□ -1.12
MSH1P25846 ERV25YML012W 636 nt8.06□□□□□ -1.12
MSH1P25846 YGR210CYGR210C 1236 nt8.05□□□□□ -1.12
MSH1P25846 CAN1YEL063C 1773 nt8.05□□□□□ -1.12
MSH1P25846 TPI1YDR050C 747 nt8.04□□□□□ -1.12
MSH1P25846 DST1YGL043W 930 nt8.04□□□□□ -1.12
MSH1P25846 YHL030W-AYHL030W-A 462 nt8.04□□□□□ -1.12
MSH1P25846 YLR460CYLR460C 1131 nt8.04□□□□□ -1.12
MSH1P25846 THI73YLR004C 1572 nt8.04□□□□□ -1.12
MSH1P25846 ADE2YOR128C 1716 nt8.03□□□□□ -1.12
MSH1P25846 ENB1YOL158C 1821 nt8.03□□□□□ -1.12
MSH1P25846 PPZ2YDR436W 2133 nt8.03□□□□□ -1.12
MSH1P25846 TCB1YOR086C 3561 nt8.03□□□□□ -1.12
MSH1P25846 HRA1HRA1 564 nt8.03□□□□□ -1.12
MSH1P25846 OLA1YBR025C 1185 nt8.03□□□□□ -1.12
MSH1P25846 RHO1YPR165W 630 nt8.03□□□□□ -1.12
MSH1P25846 FCY1YPR062W 477 nt8.01□□□□□ -1.13
MSH1P25846 TGA1tA(UGC)A 73 nt8□□□□□ -1.13
MSH1P25846 tA(UGC)EtA(UGC)E 73 nt8□□□□□ -1.13
MSH1P25846 tA(UGC)GtA(UGC)G 73 nt8□□□□□ -1.13
MSH1P25846 tA(UGC)LtA(UGC)L 73 nt8□□□□□ -1.13
MSH1P25846 tA(UGC)OtA(UGC)O 73 nt8□□□□□ -1.13
MSH1P25846 SNF4YGL115W 969 nt8□□□□□ -1.13
MSH1P25846 CSM2YIL132C 642 nt8□□□□□ -1.13
MSH1P25846 CHS7YHR142W 951 nt7.99□□□□□ -1.13
MSH1P25846 FAF1YIL019W 1041 nt7.99□□□□□ -1.13
MSH1P25846 MSS51YLR203C 1311 nt7.99□□□□□ -1.13
MSH1P25846 YGR139WYGR139W 339 nt7.98□□□□□ -1.13
MSH1P25846 YOR012WYOR012W 414 nt7.98□□□□□ -1.13
MSH1P25846 YPL108WYPL108W 507 nt7.98□□□□□ -1.13
MSH1P25846 PDC6YGR087C 1692 nt7.98□□□□□ -1.13
MSH1P25846 PRY2YKR013W 990 nt7.97□□□□□ -1.13
MSH1P25846 MNN9YPL050C 1188 nt7.97□□□□□ -1.13
MSH1P25846 FCY2YER056C 1602 nt7.96□□□□□ -1.13
MSH1P25846 PUP3YER094C 618 nt7.96□□□□□ -1.14
Retrieved 100 of 7,029 protein–RNA pairs in 66.7 ms