Protein–RNA interactions for Protein: P0C2I6

TY1B-LR3, Transposon Ty1-LR3 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-LR3P0C2I6 snR30snR30 606 nt11.63□□□□□ -0.55
TY1B-LR3P0C2I6 OPI1YHL020C 1215 nt11.62□□□□□ -0.55
TY1B-LR3P0C2I6 NAF1YNL124W 1479 nt11.6□□□□□ -0.55
TY1B-LR3P0C2I6 NPP2YEL016C 1482 nt11.59□□□□□ -0.55
TY1B-LR3P0C2I6 YML122CYML122C 381 nt11.59□□□□□ -0.55
TY1B-LR3P0C2I6 UME6YDR207C 2511 nt11.57□□□□□ -0.56
TY1B-LR3P0C2I6 SKP1YDR328C 585 nt11.56□□□□□ -0.56
TY1B-LR3P0C2I6 OPI7YDR360W 435 nt11.56□□□□□ -0.56
TY1B-LR3P0C2I6 YNL295WYNL295W 1575 nt11.56□□□□□ -0.56
TY1B-LR3P0C2I6 MRPL19YNL185C 477 nt11.55□□□□□ -0.56
TY1B-LR3P0C2I6 ERV25YML012W 636 nt11.54□□□□□ -0.56
TY1B-LR3P0C2I6 DCR2YLR361C 1737 nt11.54□□□□□ -0.56
TY1B-LR3P0C2I6 YLR162WYLR162W 357 nt11.54□□□□□ -0.56
TY1B-LR3P0C2I6 DSC3YOR223W 879 nt11.54□□□□□ -0.56
TY1B-LR3P0C2I6 YPL136WYPL136W 369 nt11.53□□□□□ -0.56
TY1B-LR3P0C2I6 HIS2YFR025C 1008 nt11.52□□□□□ -0.57
TY1B-LR3P0C2I6 SCS22YBL091C-A 528 nt11.52□□□□□ -0.57
TY1B-LR3P0C2I6 INP54YOL065C 1155 nt11.51□□□□□ -0.57
TY1B-LR3P0C2I6 INO1YJL153C 1602 nt11.51□□□□□ -0.57
TY1B-LR3P0C2I6 YPR130CYPR130C 408 nt11.5□□□□□ -0.57
TY1B-LR3P0C2I6 STE3YKL178C 1413 nt11.5□□□□□ -0.57
TY1B-LR3P0C2I6 RRP43YCR035C 1185 nt11.49□□□□□ -0.57
TY1B-LR3P0C2I6 LIA1YJR070C 978 nt11.49□□□□□ -0.57
TY1B-LR3P0C2I6 SNP1YIL061C 903 nt11.47□□□□□ -0.57
TY1B-LR3P0C2I6 YLR030WYLR030W 792 nt11.46□□□□□ -0.57
TY1B-LR3P0C2I6 CMP2YML057W 1815 nt11.46□□□□□ -0.57
TY1B-LR3P0C2I6 HAM1YJR069C 594 nt11.46□□□□□ -0.58
TY1B-LR3P0C2I6 QRI5YLR204W 336 nt11.45□□□□□ -0.58
TY1B-LR3P0C2I6 PPZ2YDR436W 2133 nt11.45□□□□□ -0.58
TY1B-LR3P0C2I6 YDR387CYDR387C 1668 nt11.44□□□□□ -0.58
TY1B-LR3P0C2I6 MTO1YGL236C 2010 nt11.44□□□□□ -0.58
TY1B-LR3P0C2I6 SSC1YJR045C 1965 nt11.43□□□□□ -0.58
TY1B-LR3P0C2I6 GPD1YDL022W 1176 nt11.43□□□□□ -0.58
TY1B-LR3P0C2I6 GLY1YEL046C 1164 nt11.43□□□□□ -0.58
TY1B-LR3P0C2I6 PRY2YKR013W 990 nt11.43□□□□□ -0.58
TY1B-LR3P0C2I6 MTC6YHR151C 1581 nt11.42□□□□□ -0.58
TY1B-LR3P0C2I6 SML1YML058W 315 nt11.41□□□□□ -0.58
TY1B-LR3P0C2I6 DMA2YNL116W 1569 nt11.41□□□□□ -0.58
TY1B-LR3P0C2I6 FIT1YDR534C 1587 nt11.4□□□□□ -0.58
TY1B-LR3P0C2I6 YGR137WYGR137W 375 nt11.4□□□□□ -0.58
TY1B-LR3P0C2I6 PIL1YGR086C 1020 nt11.39□□□□□ -0.59
TY1B-LR3P0C2I6 TIF3YPR163C 1311 nt11.39□□□□□ -0.59
TY1B-LR3P0C2I6 HRB1YNL004W 1365 nt11.39□□□□□ -0.59
TY1B-LR3P0C2I6 DST1YGL043W 930 nt11.39□□□□□ -0.59
TY1B-LR3P0C2I6 YPC1YBR183W 951 nt11.39□□□□□ -0.59
TY1B-LR3P0C2I6 HIS3YOR202W 663 nt11.38□□□□□ -0.59
TY1B-LR3P0C2I6 KRR1YCL059C 951 nt11.37□□□□□ -0.59
TY1B-LR3P0C2I6 DML1YMR211W 1428 nt11.37□□□□□ -0.59
TY1B-LR3P0C2I6 CPR2YHR057C 618 nt11.36□□□□□ -0.59
TY1B-LR3P0C2I6 AOS1YPR180W 1044 nt11.35□□□□□ -0.59
TY1B-LR3P0C2I6 IMG1YCR046C 510 nt11.34□□□□□ -0.59
TY1B-LR3P0C2I6 YKL153WYKL153W 510 nt11.34□□□□□ -0.59
TY1B-LR3P0C2I6 WSC4YHL028W 1818 nt11.34□□□□□ -0.59
TY1B-LR3P0C2I6 HXT10YFL011W 1641 nt11.34□□□□□ -0.59
TY1B-LR3P0C2I6 FCY22YER060W-A 1593 nt11.34□□□□□ -0.59
TY1B-LR3P0C2I6 YCL049CYCL049C 939 nt11.33□□□□□ -0.59
TY1B-LR3P0C2I6 VPS65YLR322W 315 nt11.33□□□□□ -0.6
TY1B-LR3P0C2I6 ELP6YMR312W 822 nt11.33□□□□□ -0.6
TY1B-LR3P0C2I6 YOR200WYOR200W 399 nt11.33□□□□□ -0.6
TY1B-LR3P0C2I6 MNN9YPL050C 1188 nt11.33□□□□□ -0.6
TY1B-LR3P0C2I6 TRP2YER090W 1524 nt11.33□□□□□ -0.6
TY1B-LR3P0C2I6 ABP1YCR088W 1779 nt11.33□□□□□ -0.6
TY1B-LR3P0C2I6 NFS1YCL017C 1494 nt11.33□□□□□ -0.6
TY1B-LR3P0C2I6 CIA1YDR267C 993 nt11.32□□□□□ -0.6
TY1B-LR3P0C2I6 DRE2YKR071C 1047 nt11.31□□□□□ -0.6
TY1B-LR3P0C2I6 NDE2YDL085W 1638 nt11.31□□□□□ -0.6
TY1B-LR3P0C2I6 WSC3YOL105C 1671 nt11.3□□□□□ -0.6
TY1B-LR3P0C2I6 THI6YPL214C 1623 nt11.3□□□□□ -0.6
TY1B-LR3P0C2I6 PAB1YER165W 1734 nt11.28□□□□□ -0.6
TY1B-LR3P0C2I6 YPT10YBR264C 600 nt11.28□□□□□ -0.6
TY1B-LR3P0C2I6 ILV6YCL009C 930 nt11.28□□□□□ -0.6
TY1B-LR3P0C2I6 INH1YDL181W 258 nt11.26□□□□□ -0.61
TY1B-LR3P0C2I6 LCL3YGL085W 825 nt11.26□□□□□ -0.61
TY1B-LR3P0C2I6 YMR209CYMR209C 1374 nt11.25□□□□□ -0.61
TY1B-LR3P0C2I6 LSC1YOR142W 990 nt11.24□□□□□ -0.61
TY1B-LR3P0C2I6 FSF1YOR271C 984 nt11.24□□□□□ -0.61
TY1B-LR3P0C2I6 YJL163CYJL163C 1668 nt11.24□□□□□ -0.61
TY1B-LR3P0C2I6 TDA4YJR116W 840 nt11.23□□□□□ -0.61
TY1B-LR3P0C2I6 CRH1YGR189C 1524 nt11.23□□□□□ -0.61
TY1B-LR3P0C2I6 MRN1YPL184C 1839 nt11.22□□□□□ -0.61
TY1B-LR3P0C2I6 RPL2AYFR031C-A 765 nt11.21□□□□□ -0.61
TY1B-LR3P0C2I6 RPL2BYIL018W 765 nt11.21□□□□□ -0.61
TY1B-LR3P0C2I6 MET13YGL125W 1803 nt11.21□□□□□ -0.62
TY1B-LR3P0C2I6 YHR218W-AYHR218W-A 318 nt11.21□□□□□ -0.62
TY1B-LR3P0C2I6 YBL112CYBL112C 318 nt11.21□□□□□ -0.62
TY1B-LR3P0C2I6 ERR3YMR323W 1314 nt11.2□□□□□ -0.62
TY1B-LR3P0C2I6 GET2YER083C 858 nt11.2□□□□□ -0.62
TY1B-LR3P0C2I6 TPO1YLL028W 1761 nt11.19□□□□□ -0.62
TY1B-LR3P0C2I6 SRM1YGL097W 1449 nt11.19□□□□□ -0.62
TY1B-LR3P0C2I6 YEL075W-AYEL075W-A 612 nt11.18□□□□□ -0.62
TY1B-LR3P0C2I6 YIL029W-AYIL029W-A 372 nt11.18□□□□□ -0.62
TY1B-LR3P0C2I6 HOC1YJR075W 1191 nt11.18□□□□□ -0.62
TY1B-LR3P0C2I6 YLR463CYLR463C 552 nt11.18□□□□□ -0.62
TY1B-LR3P0C2I6 MRP7YNL005C 1116 nt11.18□□□□□ -0.62
TY1B-LR3P0C2I6 AGX1YFL030W 1158 nt11.17□□□□□ -0.62
TY1B-LR3P0C2I6 INM1YHR046C 888 nt11.16□□□□□ -0.62
TY1B-LR3P0C2I6 CCW12YLR110C 402 nt11.16□□□□□ -0.62
TY1B-LR3P0C2I6 YMR252CYMR252C 405 nt11.16□□□□□ -0.62
TY1B-LR3P0C2I6 YOL046CYOL046C 675 nt11.16□□□□□ -0.62
TY1B-LR3P0C2I6 IRC7YFR055W 1023 nt11.16□□□□□ -0.62
Retrieved 100 of 7,029 protein–RNA pairs in 47.6 ms