Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TSPAN3O60637 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.27■■□□□ 1.8
TSPAN3O60637 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
TSPAN3O60637 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TSPAN3O60637 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
TSPAN3O60637 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
TSPAN3O60637 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TSPAN3O60637 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TSPAN3O60637 ABCB10P3-201ENST00000561950 2166 ntBASIC26.26■■□□□ 1.79
TSPAN3O60637 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.26■■□□□ 1.79
TSPAN3O60637 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TSPAN3O60637 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TSPAN3O60637 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TSPAN3O60637 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TSPAN3O60637 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TSPAN3O60637 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
TSPAN3O60637 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
TSPAN3O60637 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
TSPAN3O60637 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.26■■□□□ 1.79
TSPAN3O60637 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TSPAN3O60637 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.25■■□□□ 1.79
TSPAN3O60637 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.25■■□□□ 1.79
TSPAN3O60637 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
TSPAN3O60637 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.24■■□□□ 1.79
TSPAN3O60637 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
TSPAN3O60637 AC008813.1-201ENST00000536597 885 ntBASIC26.24■■□□□ 1.79
TSPAN3O60637 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.24■■□□□ 1.79
TSPAN3O60637 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.24■■□□□ 1.79
TSPAN3O60637 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.24■■□□□ 1.79
TSPAN3O60637 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.23■■□□□ 1.79
TSPAN3O60637 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
TSPAN3O60637 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.23■■□□□ 1.79
TSPAN3O60637 AC139426.1-201ENST00000568218 2529 ntBASIC26.21■■□□□ 1.79
TSPAN3O60637 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.21■■□□□ 1.79
TSPAN3O60637 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TSPAN3O60637 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.78
TSPAN3O60637 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
TSPAN3O60637 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
TSPAN3O60637 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
TSPAN3O60637 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.19■■□□□ 1.78
TSPAN3O60637 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
TSPAN3O60637 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
TSPAN3O60637 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TSPAN3O60637 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
TSPAN3O60637 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TSPAN3O60637 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.18■■□□□ 1.78
TSPAN3O60637 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TSPAN3O60637 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.18■■□□□ 1.78
TSPAN3O60637 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TSPAN3O60637 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
TSPAN3O60637 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.18■■□□□ 1.78
TSPAN3O60637 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.17■■□□□ 1.78
TSPAN3O60637 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
TSPAN3O60637 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.17■■□□□ 1.78
TSPAN3O60637 HSD17B1P1-201ENST00000590052 955 ntBASIC26.17■■□□□ 1.78
TSPAN3O60637 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.17■■□□□ 1.78
TSPAN3O60637 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TSPAN3O60637 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.17■■□□□ 1.78
TSPAN3O60637 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
TSPAN3O60637 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TSPAN3O60637 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.16■■□□□ 1.78
TSPAN3O60637 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TSPAN3O60637 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TSPAN3O60637 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.16■■□□□ 1.78
TSPAN3O60637 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.16■■□□□ 1.78
TSPAN3O60637 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TSPAN3O60637 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TSPAN3O60637 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TSPAN3O60637 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TSPAN3O60637 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
TSPAN3O60637 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.14■■□□□ 1.78
TSPAN3O60637 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
TSPAN3O60637 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.14■■□□□ 1.78
TSPAN3O60637 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.14■■□□□ 1.77
TSPAN3O60637 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
TSPAN3O60637 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
TSPAN3O60637 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.13■■□□□ 1.77
TSPAN3O60637 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TSPAN3O60637 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TSPAN3O60637 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
TSPAN3O60637 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TSPAN3O60637 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.11■■□□□ 1.77
TSPAN3O60637 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TSPAN3O60637 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TSPAN3O60637 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
TSPAN3O60637 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
TSPAN3O60637 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.1■■□□□ 1.77
TSPAN3O60637 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
TSPAN3O60637 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TSPAN3O60637 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.09■■□□□ 1.77
TSPAN3O60637 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
TSPAN3O60637 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
TSPAN3O60637 MIR219A2-201ENST00000608502 1504 ntBASIC26.09■■□□□ 1.77
TSPAN3O60637 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
TSPAN3O60637 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
TSPAN3O60637 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
TSPAN3O60637 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TSPAN3O60637 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.08■■□□□ 1.77
TSPAN3O60637 AC148477.6-201ENST00000623746 465 ntBASIC26.08■■□□□ 1.77
TSPAN3O60637 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms