Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
TBC1D4O60343 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TBC1D4O60343 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC27.12■■□□□ 1.93
TBC1D4O60343 RARRES2P2-201ENST00000394842 485 ntBASIC27.12■■□□□ 1.93
TBC1D4O60343 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TBC1D4O60343 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.11■■□□□ 1.93
TBC1D4O60343 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
TBC1D4O60343 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TBC1D4O60343 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC27.11■■□□□ 1.93
TBC1D4O60343 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC27.1■■□□□ 1.93
TBC1D4O60343 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
TBC1D4O60343 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.1■■□□□ 1.93
TBC1D4O60343 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.1■■□□□ 1.93
TBC1D4O60343 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC27.1■■□□□ 1.93
TBC1D4O60343 RNF126P1-201ENST00000567452 1320 ntBASIC27.1■■□□□ 1.93
TBC1D4O60343 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TBC1D4O60343 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.09■■□□□ 1.93
TBC1D4O60343 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TBC1D4O60343 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
TBC1D4O60343 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
TBC1D4O60343 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TBC1D4O60343 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
TBC1D4O60343 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TBC1D4O60343 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
TBC1D4O60343 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
TBC1D4O60343 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TBC1D4O60343 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TBC1D4O60343 CEP120-209ENST00000515110 606 ntTSL 3 BASIC27.07■■□□□ 1.92
TBC1D4O60343 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC27.07■■□□□ 1.92
TBC1D4O60343 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC27.07■■□□□ 1.92
TBC1D4O60343 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
TBC1D4O60343 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
TBC1D4O60343 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
TBC1D4O60343 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC27.06■■□□□ 1.92
TBC1D4O60343 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC27.06■■□□□ 1.92
TBC1D4O60343 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC27.06■■□□□ 1.92
TBC1D4O60343 AC022413.1-201ENST00000624602 984 ntBASIC27.06■■□□□ 1.92
TBC1D4O60343 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.06■■□□□ 1.92
TBC1D4O60343 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
TBC1D4O60343 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
TBC1D4O60343 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
TBC1D4O60343 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TBC1D4O60343 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
TBC1D4O60343 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
TBC1D4O60343 MIR219A2-201ENST00000608502 1504 ntBASIC27.03■■□□□ 1.92
TBC1D4O60343 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC27.03■■□□□ 1.92
TBC1D4O60343 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
TBC1D4O60343 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
TBC1D4O60343 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
TBC1D4O60343 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC27■■□□□ 1.91
TBC1D4O60343 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
TBC1D4O60343 AC100797.4-201ENST00000631653 1827 ntBASIC26.99■■□□□ 1.91
TBC1D4O60343 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.99■■□□□ 1.91
TBC1D4O60343 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.99■■□□□ 1.91
TBC1D4O60343 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.98■■□□□ 1.91
TBC1D4O60343 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
TBC1D4O60343 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
TBC1D4O60343 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
TBC1D4O60343 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
TBC1D4O60343 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.97■■□□□ 1.91
TBC1D4O60343 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
TBC1D4O60343 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
TBC1D4O60343 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.96■■□□□ 1.91
TBC1D4O60343 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
TBC1D4O60343 AC060814.1-201ENST00000554326 538 ntBASIC26.96■■□□□ 1.91
TBC1D4O60343 ABHD17AP5-201ENST00000580133 923 ntBASIC26.96■■□□□ 1.91
TBC1D4O60343 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.96■■□□□ 1.91
TBC1D4O60343 AL139393.2-201ENST00000608721 2025 ntBASIC26.94■■□□□ 1.9
TBC1D4O60343 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
TBC1D4O60343 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.94■■□□□ 1.9
TBC1D4O60343 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
TBC1D4O60343 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
TBC1D4O60343 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
TBC1D4O60343 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
TBC1D4O60343 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
TBC1D4O60343 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
TBC1D4O60343 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
TBC1D4O60343 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.9■■□□□ 1.9
TBC1D4O60343 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.9■■□□□ 1.9
TBC1D4O60343 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.9■■□□□ 1.9
TBC1D4O60343 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
TBC1D4O60343 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.89■■□□□ 1.9
TBC1D4O60343 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.89■■□□□ 1.89
TBC1D4O60343 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
TBC1D4O60343 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.88■■□□□ 1.89
TBC1D4O60343 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.88■■□□□ 1.89
TBC1D4O60343 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
TBC1D4O60343 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TBC1D4O60343 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.87■■□□□ 1.89
TBC1D4O60343 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
TBC1D4O60343 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.87■■□□□ 1.89
TBC1D4O60343 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
TBC1D4O60343 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
TBC1D4O60343 AC092296.2-201ENST00000589470 999 ntBASIC26.86■■□□□ 1.89
TBC1D4O60343 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TBC1D4O60343 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
TBC1D4O60343 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
TBC1D4O60343 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
TBC1D4O60343 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TBC1D4O60343 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.84■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms