Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDE6DO43924 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDE6DO43924 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDE6DO43924 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDE6DO43924 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDE6DO43924 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDE6DO43924 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDE6DO43924 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
PDE6DO43924 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.66■□□□□ 0.74
PDE6DO43924 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PDE6DO43924 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDE6DO43924 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDE6DO43924 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDE6DO43924 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDE6DO43924 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDE6DO43924 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDE6DO43924 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDE6DO43924 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.63■□□□□ 0.73
PDE6DO43924 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.63■□□□□ 0.73
PDE6DO43924 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
PDE6DO43924 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PDE6DO43924 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.62■□□□□ 0.73
PDE6DO43924 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDE6DO43924 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDE6DO43924 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDE6DO43924 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.62■□□□□ 0.73
PDE6DO43924 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDE6DO43924 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDE6DO43924 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDE6DO43924 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDE6DO43924 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6DO43924 AC093323.1-202ENST00000635031 2045 ntBASIC19.61■□□□□ 0.73
PDE6DO43924 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6DO43924 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.61■□□□□ 0.73
PDE6DO43924 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6DO43924 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6DO43924 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDE6DO43924 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.6■□□□□ 0.73
PDE6DO43924 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDE6DO43924 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDE6DO43924 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDE6DO43924 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDE6DO43924 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDE6DO43924 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDE6DO43924 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.59■□□□□ 0.73
PDE6DO43924 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PDE6DO43924 WASH5P-204ENST00000632292 975 ntBASIC19.59■□□□□ 0.73
PDE6DO43924 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
PDE6DO43924 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
PDE6DO43924 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.58■□□□□ 0.73
PDE6DO43924 AC006077.2-201ENST00000623591 457 ntBASIC19.58■□□□□ 0.72
PDE6DO43924 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.58■□□□□ 0.72
PDE6DO43924 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PDE6DO43924 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PDE6DO43924 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDE6DO43924 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PDE6DO43924 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDE6DO43924 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.56■□□□□ 0.72
PDE6DO43924 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.55■□□□□ 0.72
PDE6DO43924 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDE6DO43924 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6DO43924 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDE6DO43924 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PDE6DO43924 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.53■□□□□ 0.72
PDE6DO43924 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.53■□□□□ 0.72
PDE6DO43924 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6DO43924 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDE6DO43924 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.52■□□□□ 0.72
PDE6DO43924 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDE6DO43924 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
PDE6DO43924 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.52■□□□□ 0.71
PDE6DO43924 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.51■□□□□ 0.71
PDE6DO43924 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.51■□□□□ 0.71
PDE6DO43924 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6DO43924 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDE6DO43924 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6DO43924 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6DO43924 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.5■□□□□ 0.71
PDE6DO43924 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6DO43924 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6DO43924 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6DO43924 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6DO43924 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6DO43924 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6DO43924 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6DO43924 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6DO43924 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.49■□□□□ 0.71
PDE6DO43924 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6DO43924 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6DO43924 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6DO43924 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6DO43924 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PDE6DO43924 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6DO43924 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6DO43924 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6DO43924 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6DO43924 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PDE6DO43924 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.47■□□□□ 0.71
PDE6DO43924 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDE6DO43924 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms