Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
SEMA3EO15041 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SEMA3EO15041 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC31.02■■■□□ 2.56
SEMA3EO15041 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.02■■■□□ 2.56
SEMA3EO15041 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SEMA3EO15041 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.01■■■□□ 2.55
SEMA3EO15041 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SEMA3EO15041 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SEMA3EO15041 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SEMA3EO15041 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.99■■■□□ 2.55
SEMA3EO15041 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SEMA3EO15041 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SEMA3EO15041 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SEMA3EO15041 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SEMA3EO15041 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.98■■■□□ 2.55
SEMA3EO15041 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
SEMA3EO15041 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.97■■■□□ 2.55
SEMA3EO15041 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SEMA3EO15041 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.97■■■□□ 2.55
SEMA3EO15041 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SEMA3EO15041 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.97■■■□□ 2.55
SEMA3EO15041 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
SEMA3EO15041 GPX1-201ENST00000419349 1106 ntBASIC30.96■■■□□ 2.55
SEMA3EO15041 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.96■■■□□ 2.55
SEMA3EO15041 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.55
SEMA3EO15041 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.95■■■□□ 2.55
SEMA3EO15041 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SEMA3EO15041 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.94■■■□□ 2.54
SEMA3EO15041 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.94■■■□□ 2.54
SEMA3EO15041 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
SEMA3EO15041 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.93■■■□□ 2.54
SEMA3EO15041 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.93■■■□□ 2.54
SEMA3EO15041 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.92■■■□□ 2.54
SEMA3EO15041 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SEMA3EO15041 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SEMA3EO15041 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.92■■■□□ 2.54
SEMA3EO15041 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SEMA3EO15041 AL139393.2-201ENST00000608721 2025 ntBASIC30.91■■■□□ 2.54
SEMA3EO15041 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
SEMA3EO15041 AC100797.4-201ENST00000631653 1827 ntBASIC30.9■■■□□ 2.54
SEMA3EO15041 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
SEMA3EO15041 MIR219A2-201ENST00000608502 1504 ntBASIC30.89■■■□□ 2.54
SEMA3EO15041 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
SEMA3EO15041 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
SEMA3EO15041 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
SEMA3EO15041 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
SEMA3EO15041 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
SEMA3EO15041 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
SEMA3EO15041 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
SEMA3EO15041 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.88■■■□□ 2.53
SEMA3EO15041 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SEMA3EO15041 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
SEMA3EO15041 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
SEMA3EO15041 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.87■■■□□ 2.53
SEMA3EO15041 RNF126P1-201ENST00000567452 1320 ntBASIC30.87■■■□□ 2.53
SEMA3EO15041 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.87■■■□□ 2.53
SEMA3EO15041 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
SEMA3EO15041 RARRES2P2-201ENST00000394842 485 ntBASIC30.86■■■□□ 2.53
SEMA3EO15041 AC022413.1-201ENST00000624602 984 ntBASIC30.86■■■□□ 2.53
SEMA3EO15041 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.86■■■□□ 2.53
SEMA3EO15041 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
SEMA3EO15041 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.86■■■□□ 2.53
SEMA3EO15041 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.85■■■□□ 2.53
SEMA3EO15041 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC30.84■■■□□ 2.53
SEMA3EO15041 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
SEMA3EO15041 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SEMA3EO15041 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
SEMA3EO15041 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.83■■■□□ 2.53
SEMA3EO15041 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
SEMA3EO15041 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
SEMA3EO15041 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SEMA3EO15041 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.82■■■□□ 2.52
SEMA3EO15041 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
SEMA3EO15041 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.81■■■□□ 2.52
SEMA3EO15041 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
SEMA3EO15041 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
SEMA3EO15041 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SEMA3EO15041 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
SEMA3EO15041 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
SEMA3EO15041 HES4-202ENST00000428771 1040 ntTSL 2 BASIC30.8■■■□□ 2.52
SEMA3EO15041 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC30.8■■■□□ 2.52
SEMA3EO15041 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
SEMA3EO15041 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.78■■■□□ 2.52
SEMA3EO15041 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SEMA3EO15041 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
SEMA3EO15041 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC30.77■■■□□ 2.52
SEMA3EO15041 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
SEMA3EO15041 ABCB10P1-201ENST00000614297 2181 ntBASIC30.77■■■□□ 2.52
SEMA3EO15041 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
SEMA3EO15041 AC060814.1-201ENST00000554326 538 ntBASIC30.76■■■□□ 2.51
SEMA3EO15041 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SEMA3EO15041 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
SEMA3EO15041 ABCB10P3-201ENST00000561950 2166 ntBASIC30.73■■■□□ 2.51
SEMA3EO15041 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
SEMA3EO15041 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.73■■■□□ 2.51
SEMA3EO15041 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SEMA3EO15041 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
SEMA3EO15041 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SEMA3EO15041 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC30.72■■■□□ 2.51
SEMA3EO15041 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.72■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms