Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
DDX39AO00148 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
DDX39AO00148 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
DDX39AO00148 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC28.72■■■□□ 2.19
DDX39AO00148 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
DDX39AO00148 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.72■■■□□ 2.19
DDX39AO00148 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.71■■■□□ 2.19
DDX39AO00148 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
DDX39AO00148 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
DDX39AO00148 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
DDX39AO00148 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
DDX39AO00148 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
DDX39AO00148 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.7■■■□□ 2.19
DDX39AO00148 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC28.7■■■□□ 2.19
DDX39AO00148 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
DDX39AO00148 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.19
DDX39AO00148 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
DDX39AO00148 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC28.7■■■□□ 2.18
DDX39AO00148 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
DDX39AO00148 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
DDX39AO00148 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
DDX39AO00148 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.68■■■□□ 2.18
DDX39AO00148 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
DDX39AO00148 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
DDX39AO00148 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
DDX39AO00148 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
DDX39AO00148 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.66■■■□□ 2.18
DDX39AO00148 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
DDX39AO00148 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
DDX39AO00148 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
DDX39AO00148 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
DDX39AO00148 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
DDX39AO00148 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
DDX39AO00148 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
DDX39AO00148 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.65■■■□□ 2.18
DDX39AO00148 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
DDX39AO00148 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
DDX39AO00148 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
DDX39AO00148 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
DDX39AO00148 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
DDX39AO00148 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.65■■■□□ 2.18
DDX39AO00148 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
DDX39AO00148 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
DDX39AO00148 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.64■■■□□ 2.18
DDX39AO00148 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.64■■■□□ 2.18
DDX39AO00148 AC008813.1-201ENST00000536597 885 ntBASIC28.63■■■□□ 2.17
DDX39AO00148 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC28.63■■■□□ 2.17
DDX39AO00148 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.63■■■□□ 2.17
DDX39AO00148 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
DDX39AO00148 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
DDX39AO00148 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
DDX39AO00148 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
DDX39AO00148 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.61■■■□□ 2.17
DDX39AO00148 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.61■■■□□ 2.17
DDX39AO00148 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
DDX39AO00148 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
DDX39AO00148 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
DDX39AO00148 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.61■■■□□ 2.17
DDX39AO00148 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.61■■■□□ 2.17
DDX39AO00148 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.6■■■□□ 2.17
DDX39AO00148 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
DDX39AO00148 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
DDX39AO00148 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
DDX39AO00148 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
DDX39AO00148 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
DDX39AO00148 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
DDX39AO00148 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.17
DDX39AO00148 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
DDX39AO00148 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
DDX39AO00148 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
DDX39AO00148 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC28.57■■■□□ 2.16
DDX39AO00148 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.57■■■□□ 2.16
DDX39AO00148 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
DDX39AO00148 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
DDX39AO00148 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.57■■■□□ 2.16
DDX39AO00148 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
DDX39AO00148 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
DDX39AO00148 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
DDX39AO00148 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
DDX39AO00148 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
DDX39AO00148 CHST11-203ENST00000547956 936 ntTSL 2 BASIC28.56■■■□□ 2.16
DDX39AO00148 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC28.55■■■□□ 2.16
DDX39AO00148 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
DDX39AO00148 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.55■■■□□ 2.16
DDX39AO00148 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC28.55■■■□□ 2.16
DDX39AO00148 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
DDX39AO00148 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
DDX39AO00148 HSD17B1P1-201ENST00000590052 955 ntBASIC28.54■■■□□ 2.16
DDX39AO00148 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
DDX39AO00148 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
DDX39AO00148 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
DDX39AO00148 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.53■■■□□ 2.16
DDX39AO00148 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC28.53■■■□□ 2.16
DDX39AO00148 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.52■■■□□ 2.16
DDX39AO00148 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.52■■■□□ 2.16
DDX39AO00148 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.52■■■□□ 2.16
DDX39AO00148 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
DDX39AO00148 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
DDX39AO00148 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.5■■■□□ 2.15
DDX39AO00148 MIR219A2-201ENST00000608502 1504 ntBASIC28.5■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms