Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
TCRBV3S1A0A5B6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TCRBV3S1A0A5B6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.85■■□□□ 1.41
TCRBV3S1A0A5B6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TCRBV3S1A0A5B6 AP002365.1-201ENST00000603448 772 ntBASIC23.85■■□□□ 1.41
TCRBV3S1A0A5B6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TCRBV3S1A0A5B6 AP002414.2-202ENST00000590929 1450 ntBASIC23.85■■□□□ 1.41
TCRBV3S1A0A5B6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TCRBV3S1A0A5B6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
TCRBV3S1A0A5B6 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TCRBV3S1A0A5B6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.85■■□□□ 1.41
TCRBV3S1A0A5B6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TCRBV3S1A0A5B6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TCRBV3S1A0A5B6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.83■■□□□ 1.41
TCRBV3S1A0A5B6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TCRBV3S1A0A5B6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23.83■■□□□ 1.41
TCRBV3S1A0A5B6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC23.83■■□□□ 1.41
TCRBV3S1A0A5B6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV3S1A0A5B6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TCRBV3S1A0A5B6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TCRBV3S1A0A5B6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TCRBV3S1A0A5B6 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC23.8■■□□□ 1.4
TCRBV3S1A0A5B6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
TCRBV3S1A0A5B6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC23.8■■□□□ 1.4
TCRBV3S1A0A5B6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
TCRBV3S1A0A5B6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TCRBV3S1A0A5B6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
TCRBV3S1A0A5B6 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
TCRBV3S1A0A5B6 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TCRBV3S1A0A5B6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
TCRBV3S1A0A5B6 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TCRBV3S1A0A5B6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.78■■□□□ 1.4
TCRBV3S1A0A5B6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TCRBV3S1A0A5B6 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TCRBV3S1A0A5B6 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TCRBV3S1A0A5B6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.77■■□□□ 1.4
TCRBV3S1A0A5B6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TCRBV3S1A0A5B6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TCRBV3S1A0A5B6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TCRBV3S1A0A5B6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
TCRBV3S1A0A5B6 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TCRBV3S1A0A5B6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TCRBV3S1A0A5B6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
TCRBV3S1A0A5B6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TCRBV3S1A0A5B6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TCRBV3S1A0A5B6 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TCRBV3S1A0A5B6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TCRBV3S1A0A5B6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
TCRBV3S1A0A5B6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
TCRBV3S1A0A5B6 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
TCRBV3S1A0A5B6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TCRBV3S1A0A5B6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TCRBV3S1A0A5B6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.74■■□□□ 1.39
TCRBV3S1A0A5B6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TCRBV3S1A0A5B6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TCRBV3S1A0A5B6 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC23.73■■□□□ 1.39
TCRBV3S1A0A5B6 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
TCRBV3S1A0A5B6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TCRBV3S1A0A5B6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TCRBV3S1A0A5B6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.72■■□□□ 1.39
TCRBV3S1A0A5B6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TCRBV3S1A0A5B6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TCRBV3S1A0A5B6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23.72■■□□□ 1.39
TCRBV3S1A0A5B6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.72■■□□□ 1.39
TCRBV3S1A0A5B6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.72■■□□□ 1.39
TCRBV3S1A0A5B6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
TCRBV3S1A0A5B6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TCRBV3S1A0A5B6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
TCRBV3S1A0A5B6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.7■■□□□ 1.38
TCRBV3S1A0A5B6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TCRBV3S1A0A5B6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TCRBV3S1A0A5B6 AC093323.1-202ENST00000635031 2045 ntBASIC23.7■■□□□ 1.38
TCRBV3S1A0A5B6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
TCRBV3S1A0A5B6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TCRBV3S1A0A5B6 AC018358.1-201ENST00000631079 1402 ntBASIC23.69■■□□□ 1.38
TCRBV3S1A0A5B6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
TCRBV3S1A0A5B6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
TCRBV3S1A0A5B6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TCRBV3S1A0A5B6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.68■■□□□ 1.38
TCRBV3S1A0A5B6 DUSP8P4-201ENST00000399538 1761 ntBASIC23.68■■□□□ 1.38
TCRBV3S1A0A5B6 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TCRBV3S1A0A5B6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TCRBV3S1A0A5B6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
TCRBV3S1A0A5B6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TCRBV3S1A0A5B6 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TCRBV3S1A0A5B6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TCRBV3S1A0A5B6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
TCRBV3S1A0A5B6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TCRBV3S1A0A5B6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TCRBV3S1A0A5B6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TCRBV3S1A0A5B6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TCRBV3S1A0A5B6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TCRBV3S1A0A5B6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TCRBV3S1A0A5B6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TCRBV3S1A0A5B6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TCRBV3S1A0A5B6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TCRBV3S1A0A5B6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
TCRBV3S1A0A5B6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TCRBV3S1A0A5B6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
TCRBV3S1A0A5B6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms