Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 CYCSP10-201ENST00000417973 294 ntBASIC5.31□□□□□ -1.56
GPC1P35052 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
GPC1P35052 AC016712.1-201ENST00000431088 378 ntBASIC5.31□□□□□ -1.56
GPC1P35052 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.31□□□□□ -1.56
GPC1P35052 BX679664.1-201ENST00000434429 253 ntBASIC5.31□□□□□ -1.56
GPC1P35052 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.31□□□□□ -1.56
GPC1P35052 RPL7L1P1-201ENST00000448259 785 ntBASIC5.31□□□□□ -1.56
GPC1P35052 RPL10P17-201ENST00000453852 316 ntBASIC5.31□□□□□ -1.56
GPC1P35052 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.31□□□□□ -1.56
GPC1P35052 HLA-DPA3-207ENST00000454398 229 ntBASIC5.31□□□□□ -1.56
GPC1P35052 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.31□□□□□ -1.56
GPC1P35052 SNORD125-201ENST00000459538 96 ntBASIC5.31□□□□□ -1.56
GPC1P35052 RPL21P104-201ENST00000464143 478 ntBASIC5.31□□□□□ -1.56
GPC1P35052 HMGN1P11-201ENST00000508668 303 ntBASIC5.31□□□□□ -1.56
GPC1P35052 MIR892C-201ENST00000516410 77 ntBASIC5.31□□□□□ -1.56
GPC1P35052 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.31□□□□□ -1.56
GPC1P35052 AC008489.1-201ENST00000524271 483 ntBASIC5.31□□□□□ -1.56
GPC1P35052 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.31□□□□□ -1.56
GPC1P35052 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.31□□□□□ -1.56
GPC1P35052 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.31□□□□□ -1.56
GPC1P35052 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
GPC1P35052 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
GPC1P35052 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
GPC1P35052 AL365265.1-201ENST00000621045 234 ntBASIC5.31□□□□□ -1.56
GPC1P35052 AC097372.5-201ENST00000623665 376 ntBASIC5.31□□□□□ -1.56
GPC1P35052 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.31□□□□□ -1.56
GPC1P35052 Z99571.1-201ENST00000636677 394 ntBASIC5.31□□□□□ -1.56
GPC1P35052 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.31□□□□□ -1.56
GPC1P35052 AP001029.2-203ENST00000589795 4910 ntBASIC5.31□□□□□ -1.56
GPC1P35052 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
GPC1P35052 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.31□□□□□ -1.56
GPC1P35052 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.31□□□□□ -1.56
GPC1P35052 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
GPC1P35052 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
GPC1P35052 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GPC1P35052 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
GPC1P35052 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.3□□□□□ -1.56
GPC1P35052 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.3□□□□□ -1.56
GPC1P35052 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GPC1P35052 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.3□□□□□ -1.56
GPC1P35052 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GPC1P35052 RNU6-1290P-201ENST00000362957 109 ntBASIC5.3□□□□□ -1.56
GPC1P35052 RNU6-290P-201ENST00000365212 101 ntBASIC5.3□□□□□ -1.56
GPC1P35052 RN7SKP69-201ENST00000365390 305 ntBASIC5.3□□□□□ -1.56
GPC1P35052 SNORD50.2-201ENST00000365465 70 ntBASIC5.3□□□□□ -1.56
GPC1P35052 RNU6-827P-201ENST00000365553 106 ntBASIC5.3□□□□□ -1.56
GPC1P35052 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
GPC1P35052 RNA5SP187-201ENST00000384400 119 ntBASIC5.3□□□□□ -1.56
GPC1P35052 RNU6-1117P-201ENST00000384525 104 ntBASIC5.3□□□□□ -1.56
GPC1P35052 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.3□□□□□ -1.56
GPC1P35052 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.3□□□□□ -1.56
GPC1P35052 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.3□□□□□ -1.56
GPC1P35052 AC093655.2-201ENST00000425735 631 ntBASIC5.3□□□□□ -1.56
GPC1P35052 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.3□□□□□ -1.56
GPC1P35052 AL592045.1-201ENST00000429867 352 ntBASIC5.3□□□□□ -1.56
GPC1P35052 ELOCP18-201ENST00000434209 337 ntBASIC5.3□□□□□ -1.56
GPC1P35052 SETP5-201ENST00000437270 562 ntBASIC5.3□□□□□ -1.56
GPC1P35052 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.3□□□□□ -1.56
GPC1P35052 RN7SL197P-201ENST00000466981 299 ntBASIC5.3□□□□□ -1.56
GPC1P35052 RNU6-496P-201ENST00000516145 99 ntBASIC5.3□□□□□ -1.56
GPC1P35052 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.3□□□□□ -1.56
GPC1P35052 CASP1P1-201ENST00000526345 212 ntBASIC5.3□□□□□ -1.56
GPC1P35052 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.3□□□□□ -1.56
GPC1P35052 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.3□□□□□ -1.56
GPC1P35052 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.3□□□□□ -1.56
GPC1P35052 MIR4311-201ENST00000580794 100 ntBASIC5.3□□□□□ -1.56
GPC1P35052 MIR4310-201ENST00000582950 57 ntBASIC5.3□□□□□ -1.56
GPC1P35052 PRPF19P1-201ENST00000584766 898 ntBASIC5.3□□□□□ -1.56
GPC1P35052 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.3□□□□□ -1.56
GPC1P35052 AC008814.1-201ENST00000603797 406 ntBASIC5.3□□□□□ -1.56
GPC1P35052 AC009318.2-201ENST00000610917 651 ntBASIC5.3□□□□□ -1.56
GPC1P35052 AC138965.3-201ENST00000623875 498 ntBASIC5.3□□□□□ -1.56
GPC1P35052 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GPC1P35052 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.3□□□□□ -1.56
GPC1P35052 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GPC1P35052 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GPC1P35052 AC114947.2-201ENST00000565748 2125 ntBASIC5.3□□□□□ -1.56
GPC1P35052 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GPC1P35052 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
GPC1P35052 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.3□□□□□ -1.56
GPC1P35052 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.3□□□□□ -1.56
GPC1P35052 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
GPC1P35052 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
GPC1P35052 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
GPC1P35052 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
GPC1P35052 AC007785.2-201ENST00000598627 1916 ntBASIC5.29□□□□□ -1.56
GPC1P35052 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
GPC1P35052 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
GPC1P35052 SNORD50.1-201ENST00000362987 71 ntBASIC5.29□□□□□ -1.56
GPC1P35052 RNY3P4-201ENST00000384428 101 ntBASIC5.29□□□□□ -1.56
GPC1P35052 SNORA12.2-201ENST00000391040 156 ntBASIC5.29□□□□□ -1.56
GPC1P35052 GLULP6-201ENST00000399502 913 ntBASIC5.29□□□□□ -1.56
GPC1P35052 RNU2-43P-201ENST00000410306 190 ntBASIC5.29□□□□□ -1.56
GPC1P35052 RNU2-51P-201ENST00000410708 197 ntBASIC5.29□□□□□ -1.56
GPC1P35052 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.29□□□□□ -1.56
GPC1P35052 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.29□□□□□ -1.56
GPC1P35052 LINC02210-201ENST00000444561 288 ntBASIC5.29□□□□□ -1.56
GPC1P35052 AP006222.1-205ENST00000450734 457 ntBASIC5.29□□□□□ -1.56
GPC1P35052 IGHV5-78-201ENST00000450948 295 ntBASIC5.29□□□□□ -1.56
GPC1P35052 AC144530.1-201ENST00000452862 555 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms