Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 AC073901.1-201ENST00000462471 408 ntBASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 AC093840.1-201ENST00000511599 336 ntBASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 RNA5SP340-201ENST00000517132 107 ntBASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 MIR5692C2-201ENST00000577959 77 ntBASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 MIR3684-201ENST00000579779 74 ntBASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 MIR6768-201ENST00000610734 72 ntBASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 AC020656.2-201ENST00000613291 5309 ntBASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 AC139769.1-204ENST00000472297 1931 ntBASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 AC135776.4-201ENST00000624300 1904 ntBASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 AP002512.4-202ENST00000641599 4530 ntBASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 RNU6-318P-201ENST00000384283 103 ntBASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 AL133388.1-201ENST00000404509 287 ntBASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 AL133482.1-201ENST00000415988 498 ntBASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 RAB28P5-201ENST00000427490 651 ntBASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 AL592045.1-201ENST00000429867 352 ntBASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 Z82188.1-201ENST00000436709 154 ntBASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 CYCSP51-201ENST00000443545 318 ntBASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 FTLP8-201ENST00000446770 267 ntBASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 AL137159.1-201ENST00000452808 512 ntBASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 HIGD1AP3-201ENST00000515857 278 ntBASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 SCARNA18.1-201ENST00000516330 83 ntBASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 AL355812.1-201ENST00000603215 216 ntBASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 SRGNP1-201ENST00000603392 451 ntBASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB3Q9Y5E6 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.48
PCDHB3Q9Y5E6 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PCDHB3Q9Y5E6 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.84□□□□□ -1.48
PCDHB3Q9Y5E6 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
PCDHB3Q9Y5E6 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PCDHB3Q9Y5E6 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.84□□□□□ -1.48
PCDHB3Q9Y5E6 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
PCDHB3Q9Y5E6 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 AL391516.1-201ENST00000554380 2449 ntBASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 RNU6-653P-201ENST00000363074 106 ntBASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 Y_RNA.123-201ENST00000363338 102 ntBASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 Y_RNA.136-201ENST00000363444 102 ntBASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 RNU6-312P-201ENST00000364629 107 ntBASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 RNU6-384P-201ENST00000364900 104 ntBASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 RN7SKP229-201ENST00000410465 302 ntBASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 CHEK2P5-201ENST00000423877 246 ntBASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 RPL12P12-201ENST00000424633 501 ntBASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 AP006222.1-205ENST00000450734 457 ntBASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 RPL23AP45-201ENST00000476406 468 ntBASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 RPS4XP22-201ENST00000480755 780 ntBASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 AC012158.1-204ENST00000483430 465 ntBASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 TRBV5-2-201ENST00000489095 273 ntBASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 AK3P2-201ENST00000507976 429 ntBASIC5.83□□□□□ -1.48
PCDHB3Q9Y5E6 RNU4-57P-201ENST00000515980 135 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms