Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 Y_RNA.687-201ENST00000516558 91 ntBASIC4.63□□□□□ -1.67
VAMP1P23763 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.63□□□□□ -1.67
VAMP1P23763 HMGN2P36-201ENST00000529541 409 ntBASIC4.63□□□□□ -1.67
VAMP1P23763 CBX3P7-201ENST00000532876 502 ntBASIC4.63□□□□□ -1.67
VAMP1P23763 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.63□□□□□ -1.67
VAMP1P23763 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC4.63□□□□□ -1.67
VAMP1P23763 AL442663.2-201ENST00000554385 511 ntBASIC4.63□□□□□ -1.67
VAMP1P23763 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.63□□□□□ -1.67
VAMP1P23763 AMZ2P1-203ENST00000565833 850 ntBASIC4.63□□□□□ -1.67
VAMP1P23763 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.63□□□□□ -1.67
VAMP1P23763 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VAMP1P23763 MIR212-201ENST00000586026 110 ntBASIC4.63□□□□□ -1.67
VAMP1P23763 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.63□□□□□ -1.67
VAMP1P23763 AC013244.1-201ENST00000604279 193 ntBASIC4.63□□□□□ -1.67
VAMP1P23763 AL121917.1-203ENST00000605534 577 ntBASIC4.63□□□□□ -1.67
VAMP1P23763 AL161423.1-201ENST00000613700 262 ntBASIC4.63□□□□□ -1.67
VAMP1P23763 AC004852.3-201ENST00000614131 326 ntBASIC4.63□□□□□ -1.67
VAMP1P23763 Z69720.2-201ENST00000624755 279 ntBASIC4.63□□□□□ -1.67
VAMP1P23763 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.63□□□□□ -1.67
VAMP1P23763 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.63□□□□□ -1.67
VAMP1P23763 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.63□□□□□ -1.67
VAMP1P23763 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
VAMP1P23763 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.63□□□□□ -1.67
VAMP1P23763 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VAMP1P23763 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VAMP1P23763 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VAMP1P23763 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VAMP1P23763 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.63□□□□□ -1.67
VAMP1P23763 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
VAMP1P23763 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VAMP1P23763 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VAMP1P23763 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VAMP1P23763 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
VAMP1P23763 RNA5SP110-201ENST00000362638 115 ntBASIC4.62□□□□□ -1.67
VAMP1P23763 RN7SKP280-201ENST00000364196 304 ntBASIC4.62□□□□□ -1.67
VAMP1P23763 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VAMP1P23763 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VAMP1P23763 MIR517A-201ENST00000385001 87 ntBASIC4.62□□□□□ -1.67
VAMP1P23763 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
VAMP1P23763 Y_RNA.579-201ENST00000390939 94 ntBASIC4.62□□□□□ -1.67
VAMP1P23763 SNORA48.4-201ENST00000391089 134 ntBASIC4.62□□□□□ -1.67
VAMP1P23763 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
VAMP1P23763 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.62□□□□□ -1.67
VAMP1P23763 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.62□□□□□ -1.67
VAMP1P23763 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.62□□□□□ -1.67
VAMP1P23763 AC007679.3-201ENST00000434035 414 ntBASIC4.62□□□□□ -1.67
VAMP1P23763 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC4.62□□□□□ -1.67
VAMP1P23763 HIGD1AP2-201ENST00000446367 280 ntBASIC4.62□□□□□ -1.67
VAMP1P23763 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC4.62□□□□□ -1.67
VAMP1P23763 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VAMP1P23763 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.62□□□□□ -1.67
VAMP1P23763 AC093166.4-201ENST00000457867 318 ntBASIC4.62□□□□□ -1.67
VAMP1P23763 RNU7-187P-201ENST00000458985 68 ntBASIC4.62□□□□□ -1.67
VAMP1P23763 U8.21-201ENST00000459536 136 ntBASIC4.62□□□□□ -1.67
VAMP1P23763 RN7SL184P-201ENST00000488308 297 ntBASIC4.62□□□□□ -1.67
VAMP1P23763 UBE2CP3-201ENST00000502715 450 ntBASIC4.62□□□□□ -1.67
VAMP1P23763 IGBP1P4-201ENST00000503202 879 ntBASIC4.62□□□□□ -1.67
VAMP1P23763 AC002456.2-201ENST00000509356 380 ntBASIC4.62□□□□□ -1.67
VAMP1P23763 ZNF519P4-201ENST00000514008 125 ntBASIC4.62□□□□□ -1.67
VAMP1P23763 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.62□□□□□ -1.67
VAMP1P23763 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.62□□□□□ -1.67
VAMP1P23763 SMURF2P1-201ENST00000514992 481 ntBASIC4.62□□□□□ -1.67
VAMP1P23763 SNORA74.1-201ENST00000516320 180 ntBASIC4.62□□□□□ -1.67
VAMP1P23763 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.62□□□□□ -1.67
VAMP1P23763 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.62□□□□□ -1.67
VAMP1P23763 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.62□□□□□ -1.67
VAMP1P23763 AC006349.1-201ENST00000555526 235 ntBASIC4.62□□□□□ -1.67
VAMP1P23763 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VAMP1P23763 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.62□□□□□ -1.67
VAMP1P23763 MIR4260-201ENST00000583107 67 ntBASIC4.62□□□□□ -1.67
VAMP1P23763 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.62□□□□□ -1.67
VAMP1P23763 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.62□□□□□ -1.67
VAMP1P23763 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.62□□□□□ -1.67
VAMP1P23763 AC023206.1-201ENST00000605824 298 ntBASIC4.62□□□□□ -1.67
VAMP1P23763 AC064836.2-201ENST00000609491 462 ntBASIC4.62□□□□□ -1.67
VAMP1P23763 AC012531.5-201ENST00000611375 151 ntBASIC4.62□□□□□ -1.67
VAMP1P23763 AL161629.2-201ENST00000615347 275 ntBASIC4.62□□□□□ -1.67
VAMP1P23763 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.62□□□□□ -1.67
VAMP1P23763 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.62□□□□□ -1.67
VAMP1P23763 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.62□□□□□ -1.67
VAMP1P23763 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.62□□□□□ -1.67
VAMP1P23763 AC018529.3-201ENST00000624212 2254 ntBASIC4.62□□□□□ -1.67
VAMP1P23763 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
VAMP1P23763 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
VAMP1P23763 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
VAMP1P23763 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
VAMP1P23763 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
VAMP1P23763 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VAMP1P23763 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
VAMP1P23763 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VAMP1P23763 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.61□□□□□ -1.67
VAMP1P23763 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
VAMP1P23763 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
VAMP1P23763 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VAMP1P23763 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VAMP1P23763 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
VAMP1P23763 RNU6-827P-201ENST00000365553 106 ntBASIC4.61□□□□□ -1.67
VAMP1P23763 RNU6-898P-201ENST00000365627 104 ntBASIC4.61□□□□□ -1.67
VAMP1P23763 MIR138-2-201ENST00000384916 84 ntBASIC4.61□□□□□ -1.67
VAMP1P23763 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms