Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 U3.29-201ENST00000391296 212 ntBASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 AL355497.1-201ENST00000406262 551 ntBASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 U3.40-201ENST00000408706 208 ntBASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 RNA5SP425-201ENST00000410336 112 ntBASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 RNU6-272P-201ENST00000411028 104 ntBASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 AC099677.1-201ENST00000420575 175 ntBASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 AL139415.2-201ENST00000431968 163 ntBASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 FAM103A2P-201ENST00000444122 354 ntBASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 AC106872.3-201ENST00000495104 446 ntBASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 AC008549.1-201ENST00000512900 643 ntBASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 AC018618.2-201ENST00000604770 446 ntBASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 AC107905.1-201ENST00000616204 426 ntBASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 AL590808.1-201ENST00000618696 141 ntBASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 AC064859.1-201ENST00000624741 174 ntBASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 AL109659.3-201ENST00000624985 950 ntBASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 CR848007.1-201ENST00000442354 1699 ntBASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 SDAD1P2-201ENST00000441308 2028 ntBASIC1.73□□□□□ -2.13
TRAV27A0A087WT01 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 AL137003.2-201ENST00000606924 2538 ntBASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 HMGB1P5-201ENST00000255320 642 ntBASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 RNU1-105P-201ENST00000363470 161 ntBASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 RNU6-819P-201ENST00000364116 107 ntBASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 SNORA51.12-201ENST00000384448 134 ntBASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 SUMO2P12-201ENST00000405924 140 ntBASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 Z86062.1-201ENST00000406773 777 ntBASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 DPH3P2-201ENST00000422618 250 ntBASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 AL365496.1-201ENST00000426885 215 ntBASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 RPL7P36-201ENST00000444633 681 ntBASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 OR6K5P-201ENST00000447050 945 ntBASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 AC015724.1-201ENST00000478577 156 ntBASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 NDUFB4P2-201ENST00000509515 391 ntBASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 RNU6-488P-201ENST00000515918 99 ntBASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 AP002770.2-201ENST00000543613 532 ntBASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 GLYCAM1-201ENST00000546596 285 ntBASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 MED28P6-201ENST00000558776 231 ntBASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 AL049838.1-201ENST00000563647 981 ntBASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 CBX3P2-202ENST00000583365 535 ntBASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 AC012254.4-201ENST00000588843 273 ntBASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 AC012669.1-201ENST00000603209 283 ntBASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 VN1R74P-201ENST00000613259 503 ntBASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
TRAV27A0A087WT01 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 AL513185.3-201ENST00000433335 1300 ntBASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 RNU6-198P-201ENST00000384258 104 ntBASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 MIR7-1-201ENST00000384871 110 ntBASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 MIR634-201ENST00000385208 97 ntBASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 MTND4LP20-201ENST00000402379 270 ntBASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 RNA5SP489-201ENST00000410986 109 ntBASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 RNA5SP508-201ENST00000411327 119 ntBASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 AC004866.2-201ENST00000438285 481 ntBASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 RPS27P21-201ENST00000486977 252 ntBASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 RN7SL274P-201ENST00000492268 272 ntBASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 KLRA1P-201ENST00000503499 986 ntBASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 MTCO1P31-201ENST00000506355 492 ntBASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV27A0A087WT01 AGGF1P5-201ENST00000567900 919 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 205.9 ms