Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 UBE2Q2P6-201ENST00000612666 153 ntBASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 MIR6823-201ENST00000622118 61 ntBASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 ZNF285B-201ENST00000561698 1767 ntBASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 AL138820.1-201ENST00000617901 5305 ntBASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 AC002546.1-201ENST00000588041 2504 ntBASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 RNA5SP22-201ENST00000365393 109 ntBASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 Y_RNA.378-201ENST00000365652 113 ntBASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 FAT1P1-201ENST00000406588 507 ntBASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 MTCO3P46-201ENST00000425787 232 ntBASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 AL049745.1-201ENST00000433953 286 ntBASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 IFNA20P-201ENST00000436840 528 ntBASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 AC093019.1-201ENST00000443135 252 ntBASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 AL163193.1-201ENST00000444895 788 ntBASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 RNU7-167P-201ENST00000459160 62 ntBASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 RN7SL362P-201ENST00000494228 267 ntBASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 AC114781.4-201ENST00000513707 639 ntBASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 RNU6-1038P-201ENST00000516516 104 ntBASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 SNORA74C-1-201ENST00000580726 201 ntBASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 AC092747.3-201ENST00000603769 301 ntBASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 AL138721.1-201ENST00000616756 179 ntBASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 AC009248.2-201ENST00000619826 254 ntBASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
GTF3C3Q9Y5Q9 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 Y_RNA.166-201ENST00000363730 102 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 RNU6-1013P-201ENST00000384180 107 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 RNU6-45P-201ENST00000384471 107 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 RAP1BP3-201ENST00000407180 549 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 RNA5SP306-201ENST00000411087 107 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 RPL21P90-201ENST00000415692 466 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 USP9YP20-201ENST00000419224 558 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 AL035660.1-201ENST00000422041 222 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 AL512844.2-201ENST00000433990 593 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 AC092573.2-201ENST00000434546 243 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 HMGB3P11-201ENST00000440127 604 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 HMGB3P22-202ENST00000451823 572 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 MTND1P11-201ENST00000456661 876 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 RPL9P32-201ENST00000464118 620 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 MTCO3P9-201ENST00000506989 781 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 CCDC34P1-201ENST00000507441 517 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 Y_RNA.665-201ENST00000516177 98 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 BTF3P12-201ENST00000519620 469 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 RPL7P20-201ENST00000520308 745 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 HMGB1P40-201ENST00000525121 540 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 AL157871.3-201ENST00000557231 293 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 MTCO3P23-201ENST00000561363 289 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 MIR5583-1-201ENST00000580941 59 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 AL592436.1-201ENST00000605135 558 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 LARP7P1-201ENST00000605576 316 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 AC012603.1-201ENST00000606424 528 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 AC103705.1-201ENST00000619013 241 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 AL136221.1-201ENST00000621449 509 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 AP003400.5-201ENST00000624827 617 ntBASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 CCT7-217ENST00000626868 249 ntTSL 5 BASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
GTF3C3Q9Y5Q9 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms