Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
SH3KBP1Q96B97 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SH3KBP1Q96B97 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.85□□□□□ -1.79
SH3KBP1Q96B97 TNPO1P3-201ENST00000436471 2662 ntBASIC3.85□□□□□ -1.79
SH3KBP1Q96B97 AC009902.3-201ENST00000606235 2172 ntBASIC3.85□□□□□ -1.79
SH3KBP1Q96B97 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 RNY4P34-201ENST00000364779 95 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 SNORA75-201ENST00000384158 137 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 RPS3AP36-201ENST00000398190 775 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 RPL7P25-201ENST00000404151 721 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 SNORA57.3-201ENST00000411095 141 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 SPA17P1-201ENST00000416656 452 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 RPL17P49-201ENST00000443728 411 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 RANP8-201ENST00000444720 713 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 RPS17P13-201ENST00000448974 407 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 MTND1P27-201ENST00000451117 902 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 SSXP1-201ENST00000453640 473 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 AL033528.1-201ENST00000453780 140 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 MTCO2P18-201ENST00000457151 658 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 UBDP1-202ENST00000457888 382 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 MTND1P3-201ENST00000484956 952 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 AC055855.1-201ENST00000489563 579 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 AP002812.1-201ENST00000495378 474 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 AC096751.1-202ENST00000502691 1067 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 AC091435.1-201ENST00000505442 584 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 RNU1-45P-201ENST00000517191 141 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 AC022616.6-201ENST00000520479 119 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 AC008489.1-201ENST00000524271 483 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 RPL21P5-201ENST00000554662 472 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 AC012213.3-201ENST00000577199 777 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 HMGN1P30-201ENST00000589286 268 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 AL034351.1-201ENST00000605288 668 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 AC108747.1-201ENST00000609508 535 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 AC138932.5-201ENST00000617759 563 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 AC110994.2-201ENST00000635481 492 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 AC090740.1-201ENST00000623193 2262 ntBASIC3.84□□□□□ -1.79
SH3KBP1Q96B97 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SH3KBP1Q96B97 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 RNA5SP399-201ENST00000364003 117 ntBASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 RNU6-173P-201ENST00000364215 104 ntBASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 RNU4-91P-201ENST00000364778 135 ntBASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 RNA5SP171-201ENST00000391071 115 ntBASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 PTMAP2-201ENST00000397627 327 ntBASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 RNU6-195P-201ENST00000411352 109 ntBASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 RNU6-516P-201ENST00000411381 104 ntBASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 AC233728.2-201ENST00000425348 757 ntBASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 AC087650.1-201ENST00000431445 468 ntBASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 TBCAP1-201ENST00000436520 327 ntBASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 HMGB1P37-201ENST00000439613 609 ntBASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 RPL7P23-201ENST00000493874 747 ntBASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 RN7SL323P-201ENST00000494712 295 ntBASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 ARL2BPP4-201ENST00000506854 471 ntBASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 SNORA31.8-201ENST00000516327 108 ntBASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 RNA5SP164-201ENST00000516533 110 ntBASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 AP003122.4-201ENST00000530980 758 ntBASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 AL356432.3-201ENST00000568952 465 ntBASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 FAM60BP-201ENST00000578364 658 ntBASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 AP001330.4-201ENST00000604350 154 ntBASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 HULC.1-201ENST00000612720 240 ntBASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 AC005344.1-201ENST00000613391 459 ntBASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 AL450472.3-201ENST00000615578 367 ntBASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 AL353748.2-201ENST00000622148 471 ntBASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SH3KBP1Q96B97 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
SH3KBP1Q96B97 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.82□□□□□ -1.8
SH3KBP1Q96B97 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 195 ms