RNA–Protein interactions for RNA: ENST00000577199.1

AC012213.3-201, humanhuman

BASIC

Gene AC012213.3, Length 777 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012213.3-201ENST00000577199 AEBP2Q6ZN18 517 aaPredicted RBP33.28■■■□□ 2.92
AC012213.3-201ENST00000577199 CHIC1Q5VXU3 224 aa30.99■■■□□ 2.55
AC012213.3-201ENST00000577199 SENP3Q9H4L4 574 aaPredicted RBP28.31■■■□□ 2.12
AC012213.3-201ENST00000577199 PHF23Q9BUL5 403 aaPredicted RBP27.93■■■□□ 2.06
AC012213.3-201ENST00000577199 FOXD1Q16676 465 aa26.55■■□□□ 1.84
AC012213.3-201ENST00000577199 POTEDQ86YR6 584 aa25.35■■□□□ 1.65
AC012213.3-201ENST00000577199 MSH5O43196 834 aa24.93■■□□□ 1.58
AC012213.3-201ENST00000577199 PIAS4Q8N2W9 510 aaPredicted RBP24.6■■□□□ 1.53
AC012213.3-201ENST00000577199 PPP6R1Q9UPN7 881 aa24.48■■□□□ 1.51
AC012213.3-201ENST00000577199 PLPPR3Q6T4P5 718 aa24.45■■□□□ 1.5
AC012213.3-201ENST00000577199 ADRA2BP18089 450 aa24.32■■□□□ 1.48
AC012213.3-201ENST00000577199 MAPK8IP2Q13387 824 aaPredicted RBP22.54■■□□□ 1.2
AC012213.3-201ENST00000577199 DMRT2Q9Y5R5 561 aa22.41■■□□□ 1.18
AC012213.3-201ENST00000577199 SCAF1Q9H7N4 1312 aaKnown RBP22.08■■□□□ 1.13
AC012213.3-201ENST00000577199 CACNB1Q02641 598 aaPredicted RBP21.73■■□□□ 1.07
AC012213.3-201ENST00000577199 DCAF8L1A6NGE4 600 aa21.44■■□□□ 1.02
AC012213.3-201ENST00000577199 PPP4R3CPQ6ZMV5 832 aa21.41■■□□□ 1.02
AC012213.3-201ENST00000577199 HOXD11P31277 338 aaPredicted RBP21.4■■□□□ 1.02
AC012213.3-201ENST00000577199 RNF39Q9H2S5 420 aa21.31■■□□□ 1
AC012213.3-201ENST00000577199 CNKSR2Q8WXI2 1034 aa21.1■□□□□ 0.97
AC012213.3-201ENST00000577199 RNF216Q9NWF9 866 aaPredicted RBP21.06■□□□□ 0.96
AC012213.3-201ENST00000577199 C1QBPQ07021 282 aaKnown RBP20.9■□□□□ 0.94
AC012213.3-201ENST00000577199 DNAJC5BQ9UF47 199 aa20.72■□□□□ 0.91
AC012213.3-201ENST00000577199 NCBP3Q53F19 620 aaKnown RBP20.32■□□□□ 0.84
AC012213.3-201ENST00000577199 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.3■□□□□ 0.84
AC012213.3-201ENST00000577199 NPM3O75607 178 aaKnown RBP20.16■□□□□ 0.82
AC012213.3-201ENST00000577199 U3KPZ7 1027 aaPredicted RBP19.91■□□□□ 0.78
AC012213.3-201ENST00000577199 SPINK5Q9NQ38 1064 aaPredicted RBP19.8■□□□□ 0.76
AC012213.3-201ENST00000577199 DSG3P32926 999 aa19.78■□□□□ 0.76
AC012213.3-201ENST00000577199 POTEHQ6S545 545 aa19.72■□□□□ 0.75
AC012213.3-201ENST00000577199 CAPN15O75808 1086 aa19.69■□□□□ 0.74
AC012213.3-201ENST00000577199 SLC4A2P04920 1241 aa19.44■□□□□ 0.7
AC012213.3-201ENST00000577199 KCNA4P22459 653 aa19.31■□□□□ 0.68
AC012213.3-201ENST00000577199 TRHP20396 242 aaPredicted RBP19.26■□□□□ 0.67
AC012213.3-201ENST00000577199 ABCB7O75027 752 aa19.24■□□□□ 0.67
AC012213.3-201ENST00000577199 ZNF219Q9P2Y4 722 aaPredicted RBP19.16■□□□□ 0.66
AC012213.3-201ENST00000577199 APLP2Q06481 763 aa19.11■□□□□ 0.65
AC012213.3-201ENST00000577199 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19■□□□□ 0.63
AC012213.3-201ENST00000577199 HNRNPUL2Q1KMD3 747 aaKnown RBP19■□□□□ 0.63
AC012213.3-201ENST00000577199 SAMD1Q6SPF0 538 aaPredicted RBP18.9■□□□□ 0.62
AC012213.3-201ENST00000577199 RBM42Q9BTD8 480 aaKnown RBP18.75■□□□□ 0.59
AC012213.3-201ENST00000577199 POLA2Q14181 598 aa18.65■□□□□ 0.58
AC012213.3-201ENST00000577199 CHRDL2Q6WN34 429 aa18.64■□□□□ 0.57
AC012213.3-201ENST00000577199 MYCNP04198 464 aaPredicted RBP18.58■□□□□ 0.56
AC012213.3-201ENST00000577199 ATF5Q9Y2D1 282 aaPredicted RBP18.34■□□□□ 0.53
AC012213.3-201ENST00000577199 AKT1S1Q96B36 256 aa18.27■□□□□ 0.52
AC012213.3-201ENST00000577199 SP7Q8TDD2 431 aaPredicted RBP18.23■□□□□ 0.51
AC012213.3-201ENST00000577199 REM2Q8IYK8 340 aaPredicted RBP18.15■□□□□ 0.5
AC012213.3-201ENST00000577199 PIP4P2Q8N4L2 257 aa18.12■□□□□ 0.49
AC012213.3-201ENST00000577199 FOXD4L1Q9NU39 408 aa18.12■□□□□ 0.49
AC012213.3-201ENST00000577199 ZBTB12Q9Y330 459 aaPredicted RBP18.11■□□□□ 0.49
AC012213.3-201ENST00000577199 OSCARQ8IYS5 282 aa18.08■□□□□ 0.48
AC012213.3-201ENST00000577199 SLC4A1APQ9BWU0 796 aaKnown RBP18.05■□□□□ 0.48
AC012213.3-201ENST00000577199 PITPNM1O00562 1244 aa17.97■□□□□ 0.47
AC012213.3-201ENST00000577199 FXR2P51116 673 aaKnown RBP eCLIP17.93■□□□□ 0.46
AC012213.3-201ENST00000577199 HAX1O00165 279 aa17.87■□□□□ 0.45
AC012213.3-201ENST00000577199 ZBTB22O15209 634 aa17.81■□□□□ 0.44
AC012213.3-201ENST00000577199 EVX2Q03828 476 aa17.76■□□□□ 0.43
AC012213.3-201ENST00000577199 ATXN8OSP0DMR3 200 aa17.59■□□□□ 0.41
AC012213.3-201ENST00000577199 SPDYE2BA6NHP3 402 aa17.58■□□□□ 0.4
AC012213.3-201ENST00000577199 SPDYE6P0CI01 402 aa17.58■□□□□ 0.4
AC012213.3-201ENST00000577199 SPDYE2Q495Y8 402 aa17.58■□□□□ 0.4
AC012213.3-201ENST00000577199 PRKAR2AP13861 404 aaKnown RBP17.47■□□□□ 0.39
AC012213.3-201ENST00000577199 FBLN2P98095 1184 aa17.46■□□□□ 0.39
AC012213.3-201ENST00000577199 MKRN4PQ13434 485 aaPredicted RBP17.45■□□□□ 0.38
AC012213.3-201ENST00000577199 CLEC11AQ9Y240 323 aa17.4■□□□□ 0.38
AC012213.3-201ENST00000577199 C19orf67A6NJJ6 358 aa17.38■□□□□ 0.37
AC012213.3-201ENST00000577199 SPDYE1Q8NFV5 336 aaPredicted RBP17.38■□□□□ 0.37
AC012213.3-201ENST00000577199 SSUH2Q9Y2M2 353 aa17.35■□□□□ 0.37
AC012213.3-201ENST00000577199 ZNF692Q9BU19 519 aaPredicted RBP17.29■□□□□ 0.36
AC012213.3-201ENST00000577199 GABBR2O75899 941 aa17.25■□□□□ 0.35
AC012213.3-201ENST00000577199 CHADLQ6NUI6 762 aa17.2■□□□□ 0.34
AC012213.3-201ENST00000577199 LHX8Q68G74 356 aa17.08■□□□□ 0.32
AC012213.3-201ENST00000577199 PABPN1Q86U42 306 aaKnown RBP eCLIP17.04■□□□□ 0.32
AC012213.3-201ENST00000577199 PRR29P0C7W0 189 aa17.03■□□□□ 0.32
AC012213.3-201ENST00000577199 POTEIP0CG38 1075 aa16.95■□□□□ 0.3
AC012213.3-201ENST00000577199 CD44P16070 742 aaKnown RBP16.87■□□□□ 0.29
AC012213.3-201ENST00000577199 FARP1Q9Y4F1 1045 aaPredicted RBP16.86■□□□□ 0.29
AC012213.3-201ENST00000577199 CLCN6P51797 869 aa16.67■□□□□ 0.26
AC012213.3-201ENST00000577199 ZNF579Q8NAF0 562 aaKnown RBP16.6■□□□□ 0.25
AC012213.3-201ENST00000577199 DCBLD2Q96PD2 775 aa16.57■□□□□ 0.24
AC012213.3-201ENST00000577199 CREBZFQ9NS37 354 aa16.57■□□□□ 0.24
AC012213.3-201ENST00000577199 ZRANB1Q9UGI0 708 aa16.54■□□□□ 0.24
AC012213.3-201ENST00000577199 GALR2O43603 387 aaPredicted RBP16.47■□□□□ 0.23
AC012213.3-201ENST00000577199 CSRNP3Q8WYN3 585 aa16.47■□□□□ 0.23
AC012213.3-201ENST00000577199 POTEB2H3BUK9 544 aa16.39■□□□□ 0.21
AC012213.3-201ENST00000577199 OTUD5Q96G74 571 aa16.39■□□□□ 0.21
AC012213.3-201ENST00000577199 PLSCR2Q9NRY7 297 aa16.38■□□□□ 0.21
AC012213.3-201ENST00000577199 STAG3Q9UJ98 1225 aa16.38■□□□□ 0.21
AC012213.3-201ENST00000577199 PHF12Q96QT6 1004 aa16.32■□□□□ 0.2
AC012213.3-201ENST00000577199 MNX1P50219 401 aaPredicted RBP16.26■□□□□ 0.19
AC012213.3-201ENST00000577199 PELP1Q8IZL8 1130 aaKnown RBP16.26■□□□□ 0.19
AC012213.3-201ENST00000577199 SPDYE4A6NLX3 237 aa16.25■□□□□ 0.19
AC012213.3-201ENST00000577199 PAK3O75914 559 aaPredicted RBP16.19■□□□□ 0.18
AC012213.3-201ENST00000577199 NPM1P06748 294 aaKnown RBP eCLIP16.12■□□□□ 0.17
AC012213.3-201ENST00000577199 POTEMA6NI47 508 aa16.11■□□□□ 0.17
AC012213.3-201ENST00000577199 POTEJP0CG39 1038 aa16.09■□□□□ 0.17
AC012213.3-201ENST00000577199 ASTLQ6HA08 431 aaPredicted RBP16.08■□□□□ 0.16
AC012213.3-201ENST00000577199 MS4A3Q96HJ5 214 aa16.08■□□□□ 0.16
AC012213.3-201ENST00000577199 POTEGQ6S5H5 508 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms