Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.65□□□□□ -1.82
SOX2P48431 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SOX2P48431 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SOX2P48431 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SOX2P48431 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.65□□□□□ -1.83
SOX2P48431 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SOX2P48431 RNU6-451P-201ENST00000362921 107 ntBASIC3.65□□□□□ -1.83
SOX2P48431 SNORD3H-201ENST00000384486 214 ntBASIC3.65□□□□□ -1.83
SOX2P48431 MIR454-201ENST00000390180 115 ntBASIC3.65□□□□□ -1.83
SOX2P48431 RNA5SP36-201ENST00000410197 133 ntBASIC3.65□□□□□ -1.83
SOX2P48431 RNU2-43P-201ENST00000410306 190 ntBASIC3.65□□□□□ -1.83
SOX2P48431 RNU2-36P-201ENST00000410361 191 ntBASIC3.65□□□□□ -1.83
SOX2P48431 RNA5SP118-201ENST00000410385 109 ntBASIC3.65□□□□□ -1.83
SOX2P48431 RNU2-39P-201ENST00000410604 198 ntBASIC3.65□□□□□ -1.83
SOX2P48431 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SOX2P48431 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.65□□□□□ -1.83
SOX2P48431 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.65□□□□□ -1.83
SOX2P48431 AL162389.1-201ENST00000449233 177 ntBASIC3.65□□□□□ -1.83
SOX2P48431 HMGB3P22-202ENST00000451823 572 ntBASIC3.65□□□□□ -1.83
SOX2P48431 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.65□□□□□ -1.83
SOX2P48431 RPL23AP81-201ENST00000455252 467 ntBASIC3.65□□□□□ -1.83
SOX2P48431 RN7SL329P-201ENST00000467740 299 ntBASIC3.65□□□□□ -1.83
SOX2P48431 AC006512.1-201ENST00000468816 291 ntBASIC3.65□□□□□ -1.83
SOX2P48431 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
SOX2P48431 AC078785.3-201ENST00000476607 425 ntBASIC3.65□□□□□ -1.83
SOX2P48431 AC126389.1-201ENST00000477436 290 ntBASIC3.65□□□□□ -1.83
SOX2P48431 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.65□□□□□ -1.83
SOX2P48431 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.65□□□□□ -1.83
SOX2P48431 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.65□□□□□ -1.83
SOX2P48431 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.65□□□□□ -1.83
SOX2P48431 OR5BN1P-201ENST00000532955 829 ntBASIC3.65□□□□□ -1.83
SOX2P48431 AC123904.3-201ENST00000547218 814 ntBASIC3.65□□□□□ -1.83
SOX2P48431 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.65□□□□□ -1.83
SOX2P48431 MIR4270-201ENST00000581799 70 ntBASIC3.65□□□□□ -1.83
SOX2P48431 SNORD84-203ENST00000584275 78 ntBASIC3.65□□□□□ -1.83
SOX2P48431 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.65□□□□□ -1.83
SOX2P48431 AC113403.1-201ENST00000604910 193 ntBASIC3.65□□□□□ -1.83
SOX2P48431 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.65□□□□□ -1.83
SOX2P48431 AC012409.3-201ENST00000611343 981 ntBASIC3.65□□□□□ -1.83
SOX2P48431 DISC2.1-201ENST00000612827 205 ntBASIC3.65□□□□□ -1.83
SOX2P48431 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.65□□□□□ -1.83
SOX2P48431 TUG1_2.1-201ENST00000614234 87 ntBASIC3.65□□□□□ -1.83
SOX2P48431 AL354950.2-201ENST00000617939 290 ntBASIC3.65□□□□□ -1.83
SOX2P48431 AL713922.2-201ENST00000619384 716 ntBASIC3.65□□□□□ -1.83
SOX2P48431 RMST_9.1-201ENST00000619945 193 ntBASIC3.65□□□□□ -1.83
SOX2P48431 AC024940.5-201ENST00000622889 474 ntBASIC3.65□□□□□ -1.83
SOX2P48431 C2orf27A-204ENST00000623058 969 ntBASIC3.65□□□□□ -1.83
SOX2P48431 AL445363.3-201ENST00000623080 671 ntBASIC3.65□□□□□ -1.83
SOX2P48431 AC243312.2-201ENST00000623340 601 ntBASIC3.65□□□□□ -1.83
SOX2P48431 AP003122.6-201ENST00000623831 495 ntBASIC3.65□□□□□ -1.83
SOX2P48431 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SOX2P48431 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
SOX2P48431 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SOX2P48431 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.65□□□□□ -1.83
SOX2P48431 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
SOX2P48431 AC025031.4-201ENST00000621248 3271 ntBASIC3.65□□□□□ -1.83
SOX2P48431 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
SOX2P48431 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.65□□□□□ -1.83
SOX2P48431 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SOX2P48431 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SOX2P48431 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SOX2P48431 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.64□□□□□ -1.83
SOX2P48431 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SOX2P48431 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.64□□□□□ -1.83
SOX2P48431 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SOX2P48431 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SOX2P48431 AC073343.1-201ENST00000328239 651 ntBASIC3.64□□□□□ -1.83
SOX2P48431 Y_RNA.160-201ENST00000363677 92 ntBASIC3.64□□□□□ -1.83
SOX2P48431 RNU6-1284P-201ENST00000363701 100 ntBASIC3.64□□□□□ -1.83
SOX2P48431 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.64□□□□□ -1.83
SOX2P48431 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SOX2P48431 AL356776.1-201ENST00000406574 447 ntBASIC3.64□□□□□ -1.83
SOX2P48431 SNORA11F-201ENST00000408237 128 ntBASIC3.64□□□□□ -1.83
SOX2P48431 SSXP9-201ENST00000417503 292 ntBASIC3.64□□□□□ -1.83
SOX2P48431 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.64□□□□□ -1.83
SOX2P48431 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.64□□□□□ -1.83
SOX2P48431 RPEP3-201ENST00000425462 676 ntBASIC3.64□□□□□ -1.83
SOX2P48431 AL732292.1-201ENST00000426692 226 ntBASIC3.64□□□□□ -1.83
SOX2P48431 AL360081.1-201ENST00000428299 555 ntBASIC3.64□□□□□ -1.83
SOX2P48431 USP12PX-201ENST00000432383 1057 ntBASIC3.64□□□□□ -1.83
SOX2P48431 AC011998.1-201ENST00000433403 117 ntBASIC3.64□□□□□ -1.83
SOX2P48431 AL121601.2-201ENST00000438019 707 ntBASIC3.64□□□□□ -1.83
SOX2P48431 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SOX2P48431 AC004866.2-201ENST00000438285 481 ntBASIC3.64□□□□□ -1.83
SOX2P48431 AL671855.1-201ENST00000446875 1203 ntBASIC3.64□□□□□ -1.83
SOX2P48431 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.64□□□□□ -1.83
SOX2P48431 SNORD108-201ENST00000459332 71 ntBASIC3.64□□□□□ -1.83
SOX2P48431 AC008481.1-201ENST00000463278 396 ntBASIC3.64□□□□□ -1.83
SOX2P48431 RPS27AP1-201ENST00000475545 471 ntBASIC3.64□□□□□ -1.83
SOX2P48431 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
SOX2P48431 NDUFA5P12-201ENST00000503796 343 ntBASIC3.64□□□□□ -1.83
SOX2P48431 AC116562.3-201ENST00000506136 177 ntBASIC3.64□□□□□ -1.83
SOX2P48431 AC026427.2-201ENST00000506228 536 ntBASIC3.64□□□□□ -1.83
SOX2P48431 AC018710.1-201ENST00000506509 158 ntBASIC3.64□□□□□ -1.83
SOX2P48431 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.64□□□□□ -1.83
SOX2P48431 RNA5SP401-201ENST00000515920 127 ntBASIC3.64□□□□□ -1.83
SOX2P48431 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.64□□□□□ -1.83
SOX2P48431 IGKV1-32-201ENST00000519290 311 ntBASIC3.64□□□□□ -1.83
SOX2P48431 AC100870.1-201ENST00000522035 505 ntBASIC3.64□□□□□ -1.83
SOX2P48431 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms