Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC9.52□□□□□ -0.89
SCAF1Q9H7N4 HSPE1P13-201ENST00000451143 297 ntBASIC9.52□□□□□ -0.89
SCAF1Q9H7N4 RN7SL273P-201ENST00000481561 299 ntBASIC9.52□□□□□ -0.89
SCAF1Q9H7N4 RPL32P33-201ENST00000487023 394 ntBASIC9.52□□□□□ -0.89
SCAF1Q9H7N4 AC025458.1-201ENST00000506046 166 ntBASIC9.52□□□□□ -0.89
SCAF1Q9H7N4 SNRPCP6-201ENST00000528310 210 ntBASIC9.52□□□□□ -0.89
SCAF1Q9H7N4 MIR3135A-201ENST00000578460 77 ntBASIC9.52□□□□□ -0.89
SCAF1Q9H7N4 MIR1273C-201ENST00000578669 77 ntBASIC9.52□□□□□ -0.89
SCAF1Q9H7N4 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC9.52□□□□□ -0.89
SCAF1Q9H7N4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC9.52□□□□□ -0.89
SCAF1Q9H7N4 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC9.52□□□□□ -0.89
SCAF1Q9H7N4 AC114477.1-201ENST00000605097 605 ntBASIC9.52□□□□□ -0.89
SCAF1Q9H7N4 AC024884.1-201ENST00000620583 399 ntBASIC9.52□□□□□ -0.89
SCAF1Q9H7N4 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 SNORD115-32-201ENST00000364079 82 ntBASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 MIR10B-201ENST00000385011 110 ntBASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 AC007568.1-201ENST00000422912 471 ntBASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 HMGN2P32-201ENST00000444648 269 ntBASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 RN7SL799P-201ENST00000475891 298 ntBASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 APOOP4-201ENST00000513530 597 ntBASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 NF1P5-201ENST00000588287 448 ntBASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 AC005255.1-201ENST00000593748 216 ntBASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 CDC42EP3P1-201ENST00000601004 764 ntBASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 AP001318.4-201ENST00000616637 121 ntBASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
SCAF1Q9H7N4 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 AC232271.1-201ENST00000602455 2715 ntBASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 AC009779.8-201ENST00000641684 4384 ntBASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 RNU6-1017P-201ENST00000363613 106 ntBASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 RNU6-1248P-201ENST00000391096 64 ntBASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 AL158147.1-201ENST00000443970 75 ntBASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 LSM3P4-201ENST00000502948 309 ntBASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 BTF3L4P4-201ENST00000506381 449 ntBASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 UBL5P4-201ENST00000562584 236 ntBASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 SNORD95-201ENST00000579879 68 ntBASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 AL391813.1-201ENST00000603098 260 ntBASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 AC087783.2-201ENST00000605070 562 ntBASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SCAF1Q9H7N4 AC025809.2-201ENST00000625085 1802 ntBASIC9.49□□□□□ -0.89
SCAF1Q9H7N4 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
SCAF1Q9H7N4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SCAF1Q9H7N4 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC9.49□□□□□ -0.89
SCAF1Q9H7N4 ADAM5-202ENST00000399789 1942 ntBASIC9.49□□□□□ -0.89
SCAF1Q9H7N4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SCAF1Q9H7N4 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
SCAF1Q9H7N4 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SCAF1Q9H7N4 PPIAP24-201ENST00000328558 471 ntBASIC9.49□□□□□ -0.89
SCAF1Q9H7N4 RNU1-84P-201ENST00000365447 164 ntBASIC9.49□□□□□ -0.89
SCAF1Q9H7N4 MIR626-201ENST00000385032 94 ntBASIC9.49□□□□□ -0.89
SCAF1Q9H7N4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC9.49□□□□□ -0.89
SCAF1Q9H7N4 RNU6-554P-201ENST00000410466 106 ntBASIC9.49□□□□□ -0.89
SCAF1Q9H7N4 OR2AT2P-201ENST00000413438 905 ntBASIC9.49□□□□□ -0.89
SCAF1Q9H7N4 EDDM3CP-201ENST00000415977 425 ntBASIC9.49□□□□□ -0.89
SCAF1Q9H7N4 AC004386.2-201ENST00000441858 148 ntBASIC9.49□□□□□ -0.89
SCAF1Q9H7N4 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC9.49□□□□□ -0.89
SCAF1Q9H7N4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC9.49□□□□□ -0.89
SCAF1Q9H7N4 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC9.49□□□□□ -0.89
SCAF1Q9H7N4 RN7SL379P-201ENST00000479912 293 ntBASIC9.49□□□□□ -0.89
SCAF1Q9H7N4 RNU5F-2P-201ENST00000516066 82 ntBASIC9.49□□□□□ -0.89
SCAF1Q9H7N4 RNU6-1315P-201ENST00000517187 99 ntBASIC9.49□□□□□ -0.89
SCAF1Q9H7N4 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC9.49□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 214.8 ms