Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC6.05□□□□□ -1.44
PHOX2BQ99453 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.05□□□□□ -1.44
PHOX2BQ99453 AC073657.2-201ENST00000605661 303 ntBASIC6.05□□□□□ -1.44
PHOX2BQ99453 AC037487.3-201ENST00000606668 112 ntBASIC6.05□□□□□ -1.44
PHOX2BQ99453 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PHOX2BQ99453 RN7SL544P-201ENST00000617232 284 ntBASIC6.05□□□□□ -1.44
PHOX2BQ99453 RN7SL763P-201ENST00000620922 284 ntBASIC6.05□□□□□ -1.44
PHOX2BQ99453 AC091953.3-201ENST00000623220 236 ntBASIC6.05□□□□□ -1.44
PHOX2BQ99453 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.05□□□□□ -1.44
PHOX2BQ99453 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PHOX2BQ99453 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PHOX2BQ99453 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PHOX2BQ99453 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PHOX2BQ99453 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
PHOX2BQ99453 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
PHOX2BQ99453 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.05□□□□□ -1.44
PHOX2BQ99453 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PHOX2BQ99453 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PHOX2BQ99453 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PHOX2BQ99453 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PHOX2BQ99453 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PHOX2BQ99453 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PHOX2BQ99453 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PHOX2BQ99453 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.05□□□□□ -1.44
PHOX2BQ99453 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PHOX2BQ99453 CASC19-228ENST00000641414 1684 ntBASIC6.04□□□□□ -1.44
PHOX2BQ99453 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
PHOX2BQ99453 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PHOX2BQ99453 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PHOX2BQ99453 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
PHOX2BQ99453 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PHOX2BQ99453 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
PHOX2BQ99453 SELENOWP1-201ENST00000322792 252 ntBASIC6.04□□□□□ -1.44
PHOX2BQ99453 RNU5A-1-201ENST00000362698 116 ntBASIC6.04□□□□□ -1.44
PHOX2BQ99453 RNU6-227P-201ENST00000362865 103 ntBASIC6.04□□□□□ -1.44
PHOX2BQ99453 RNU6-512P-201ENST00000364438 103 ntBASIC6.04□□□□□ -1.44
PHOX2BQ99453 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PHOX2BQ99453 Y_RNA.405-201ENST00000383979 100 ntBASIC6.04□□□□□ -1.44
PHOX2BQ99453 Y_RNA.451-201ENST00000384200 100 ntBASIC6.04□□□□□ -1.44
PHOX2BQ99453 SNORD63-201ENST00000384262 68 ntBASIC6.04□□□□□ -1.44
PHOX2BQ99453 Y_RNA.524-201ENST00000384564 100 ntBASIC6.04□□□□□ -1.44
PHOX2BQ99453 Y_RNA.561-201ENST00000384694 100 ntBASIC6.04□□□□□ -1.44
PHOX2BQ99453 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PHOX2BQ99453 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC6.04□□□□□ -1.44
PHOX2BQ99453 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.04□□□□□ -1.44
PHOX2BQ99453 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.04□□□□□ -1.44
PHOX2BQ99453 MRPL42P6-201ENST00000486397 371 ntBASIC6.04□□□□□ -1.44
PHOX2BQ99453 RNU6-1278P-201ENST00000516130 107 ntBASIC6.04□□□□□ -1.44
PHOX2BQ99453 RNU6-496P-201ENST00000516145 99 ntBASIC6.04□□□□□ -1.44
PHOX2BQ99453 Y_RNA.683-201ENST00000516508 93 ntBASIC6.04□□□□□ -1.44
PHOX2BQ99453 AC084851.1-201ENST00000529105 249 ntBASIC6.04□□□□□ -1.44
PHOX2BQ99453 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC6.04□□□□□ -1.44
PHOX2BQ99453 AC022968.1-201ENST00000567372 442 ntBASIC6.04□□□□□ -1.44
PHOX2BQ99453 AC008121.1-201ENST00000603244 268 ntBASIC6.04□□□□□ -1.44
PHOX2BQ99453 SRGNP1-201ENST00000603392 451 ntBASIC6.04□□□□□ -1.44
PHOX2BQ99453 AL136131.3-201ENST00000607600 188 ntBASIC6.04□□□□□ -1.44
PHOX2BQ99453 FAM25E-202ENST00000608562 189 ntBASIC6.04□□□□□ -1.44
PHOX2BQ99453 AC240442.1-201ENST00000616055 283 ntBASIC6.04□□□□□ -1.44
PHOX2BQ99453 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC6.04□□□□□ -1.44
PHOX2BQ99453 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.04□□□□□ -1.44
PHOX2BQ99453 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PHOX2BQ99453 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC6.04□□□□□ -1.44
PHOX2BQ99453 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PHOX2BQ99453 AP000432.2-201ENST00000624164 2048 ntBASIC6.04□□□□□ -1.44
PHOX2BQ99453 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PHOX2BQ99453 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.04□□□□□ -1.44
PHOX2BQ99453 AC009812.4-201ENST00000569134 1805 ntBASIC6.04□□□□□ -1.44
PHOX2BQ99453 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PHOX2BQ99453 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
PHOX2BQ99453 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PHOX2BQ99453 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC6.03□□□□□ -1.44
PHOX2BQ99453 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
PHOX2BQ99453 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PHOX2BQ99453 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PHOX2BQ99453 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC6.03□□□□□ -1.44
PHOX2BQ99453 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC6.03□□□□□ -1.44
PHOX2BQ99453 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PHOX2BQ99453 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
PHOX2BQ99453 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PHOX2BQ99453 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PHOX2BQ99453 Y_RNA.44-201ENST00000362676 108 ntBASIC6.03□□□□□ -1.44
PHOX2BQ99453 SNORA51.8-201ENST00000384234 132 ntBASIC6.03□□□□□ -1.44
PHOX2BQ99453 AL022722.2-201ENST00000402519 180 ntBASIC6.03□□□□□ -1.44
PHOX2BQ99453 Y_RNA.602-201ENST00000410535 92 ntBASIC6.03□□□□□ -1.44
PHOX2BQ99453 RN7SKP27-201ENST00000410684 333 ntBASIC6.03□□□□□ -1.44
PHOX2BQ99453 AL451074.5-201ENST00000415894 435 ntBASIC6.03□□□□□ -1.44
PHOX2BQ99453 NME1P1-201ENST00000420914 382 ntBASIC6.03□□□□□ -1.44
PHOX2BQ99453 RPL7L1P9-201ENST00000431298 745 ntBASIC6.03□□□□□ -1.44
PHOX2BQ99453 AL627311.1-201ENST00000431514 115 ntBASIC6.03□□□□□ -1.44
PHOX2BQ99453 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.03□□□□□ -1.44
PHOX2BQ99453 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC6.03□□□□□ -1.44
PHOX2BQ99453 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PHOX2BQ99453 AC100832.1-201ENST00000471945 383 ntBASIC6.03□□□□□ -1.44
PHOX2BQ99453 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
PHOX2BQ99453 RPS29P26-201ENST00000477483 171 ntBASIC6.03□□□□□ -1.44
PHOX2BQ99453 RN7SL57P-201ENST00000493687 290 ntBASIC6.03□□□□□ -1.44
PHOX2BQ99453 IGKV1D-22-201ENST00000518953 324 ntBASIC6.03□□□□□ -1.44
PHOX2BQ99453 AC134698.5-201ENST00000519444 336 ntBASIC6.03□□□□□ -1.44
PHOX2BQ99453 AC025755.1-201ENST00000521306 278 ntBASIC6.03□□□□□ -1.44
PHOX2BQ99453 AC007458.1-201ENST00000542812 373 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms