RNA–Protein interactions for RNA: ENST00000516130.1

RNU6-1278P-201, Transcript of RNA, U6 small nuclear 1278, pseudogene, humanhuman

BASIC

Gene RNU6-1278P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1278P-201ENST00000516130 AEBP2Q6ZN18 517 aaPredicted RBP18.55■□□□□ 0.56
RNU6-1278P-201ENST00000516130 CHIC1Q5VXU3 224 aa17.34■□□□□ 0.37
RNU6-1278P-201ENST00000516130 SENP3Q9H4L4 574 aaPredicted RBP15.92■□□□□ 0.14
RNU6-1278P-201ENST00000516130 PHF23Q9BUL5 403 aaPredicted RBP15.62■□□□□ 0.09
RNU6-1278P-201ENST00000516130 FOXD1Q16676 465 aa14.86□□□□□ -0.03
RNU6-1278P-201ENST00000516130 POTEDQ86YR6 584 aa14.48□□□□□ -0.09
RNU6-1278P-201ENST00000516130 MSH5O43196 834 aa14.11□□□□□ -0.15
RNU6-1278P-201ENST00000516130 PIAS4Q8N2W9 510 aaPredicted RBP13.76□□□□□ -0.21
RNU6-1278P-201ENST00000516130 PLPPR3Q6T4P5 718 aa13.56□□□□□ -0.24
RNU6-1278P-201ENST00000516130 PPP6R1Q9UPN7 881 aa13.54□□□□□ -0.24
RNU6-1278P-201ENST00000516130 ADRA2BP18089 450 aa13.45□□□□□ -0.26
RNU6-1278P-201ENST00000516130 DMRT2Q9Y5R5 561 aa12.56□□□□□ -0.4
RNU6-1278P-201ENST00000516130 MAPK8IP2Q13387 824 aaPredicted RBP12.48□□□□□ -0.41
RNU6-1278P-201ENST00000516130 SCAF1Q9H7N4 1312 aaKnown RBP12.36□□□□□ -0.43
RNU6-1278P-201ENST00000516130 CACNB1Q02641 598 aaPredicted RBP12.32□□□□□ -0.44
RNU6-1278P-201ENST00000516130 RNF39Q9H2S5 420 aa12□□□□□ -0.49
RNU6-1278P-201ENST00000516130 DCAF8L1A6NGE4 600 aa11.95□□□□□ -0.5
RNU6-1278P-201ENST00000516130 HOXD11P31277 338 aaPredicted RBP11.95□□□□□ -0.5
RNU6-1278P-201ENST00000516130 C1QBPQ07021 282 aaKnown RBP11.81□□□□□ -0.52
RNU6-1278P-201ENST00000516130 PPP4R3CPQ6ZMV5 832 aa11.79□□□□□ -0.52
RNU6-1278P-201ENST00000516130 RNF216Q9NWF9 866 aaPredicted RBP11.73□□□□□ -0.53
RNU6-1278P-201ENST00000516130 CNKSR2Q8WXI2 1034 aa11.7□□□□□ -0.54
RNU6-1278P-201ENST00000516130 DNAJC5BQ9UF47 199 aa11.7□□□□□ -0.54
RNU6-1278P-201ENST00000516130 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.31□□□□□ -0.6
RNU6-1278P-201ENST00000516130 POTEHQ6S545 545 aa11.26□□□□□ -0.61
RNU6-1278P-201ENST00000516130 NCBP3Q53F19 620 aaKnown RBP11.23□□□□□ -0.61
RNU6-1278P-201ENST00000516130 DSG3P32926 999 aa11.07□□□□□ -0.64
RNU6-1278P-201ENST00000516130 U3KPZ7 1027 aaPredicted RBP11.06□□□□□ -0.64
RNU6-1278P-201ENST00000516130 NPM3O75607 178 aaKnown RBP11.05□□□□□ -0.64
RNU6-1278P-201ENST00000516130 SPINK5Q9NQ38 1064 aaPredicted RBP11□□□□□ -0.65
RNU6-1278P-201ENST00000516130 CAPN15O75808 1086 aa10.98□□□□□ -0.65
RNU6-1278P-201ENST00000516130 APLP2Q06481 763 aa10.73□□□□□ -0.69
RNU6-1278P-201ENST00000516130 ZNF219Q9P2Y4 722 aaPredicted RBP10.73□□□□□ -0.69
RNU6-1278P-201ENST00000516130 SLC4A2P04920 1241 aa10.68□□□□□ -0.7
RNU6-1278P-201ENST00000516130 TRHP20396 242 aaPredicted RBP10.68□□□□□ -0.7
RNU6-1278P-201ENST00000516130 ABCB7O75027 752 aa10.66□□□□□ -0.7
RNU6-1278P-201ENST00000516130 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.62□□□□□ -0.71
RNU6-1278P-201ENST00000516130 HNRNPUL2Q1KMD3 747 aaKnown RBP10.62□□□□□ -0.71
RNU6-1278P-201ENST00000516130 RBM42Q9BTD8 480 aaKnown RBP10.6□□□□□ -0.71
RNU6-1278P-201ENST00000516130 SAMD1Q6SPF0 538 aaPredicted RBP10.53□□□□□ -0.72
RNU6-1278P-201ENST00000516130 CHRDL2Q6WN34 429 aa10.51□□□□□ -0.73
RNU6-1278P-201ENST00000516130 KCNA4P22459 653 aa10.43□□□□□ -0.74
RNU6-1278P-201ENST00000516130 SP7Q8TDD2 431 aaPredicted RBP10.36□□□□□ -0.75
RNU6-1278P-201ENST00000516130 POLA2Q14181 598 aa10.32□□□□□ -0.76
RNU6-1278P-201ENST00000516130 AKT1S1Q96B36 256 aa10.26□□□□□ -0.77
RNU6-1278P-201ENST00000516130 MYCNP04198 464 aaPredicted RBP10.25□□□□□ -0.77
RNU6-1278P-201ENST00000516130 PIP4P2Q8N4L2 257 aa10.16□□□□□ -0.78
RNU6-1278P-201ENST00000516130 ZBTB12Q9Y330 459 aaPredicted RBP10.14□□□□□ -0.79
RNU6-1278P-201ENST00000516130 REM2Q8IYK8 340 aaPredicted RBP10.13□□□□□ -0.79
RNU6-1278P-201ENST00000516130 FXR2P51116 673 aaKnown RBP eCLIP10.06□□□□□ -0.8
RNU6-1278P-201ENST00000516130 HAX1O00165 279 aa10.05□□□□□ -0.8
RNU6-1278P-201ENST00000516130 PITPNM1O00562 1244 aa10.03□□□□□ -0.8
RNU6-1278P-201ENST00000516130 OSCARQ8IYS5 282 aa10.01□□□□□ -0.81
RNU6-1278P-201ENST00000516130 ATF5Q9Y2D1 282 aaPredicted RBP10□□□□□ -0.81
RNU6-1278P-201ENST00000516130 EVX2Q03828 476 aa9.91□□□□□ -0.82
RNU6-1278P-201ENST00000516130 FOXD4L1Q9NU39 408 aa9.91□□□□□ -0.82
RNU6-1278P-201ENST00000516130 SPDYE2BA6NHP3 402 aa9.79□□□□□ -0.84
RNU6-1278P-201ENST00000516130 SPDYE6P0CI01 402 aa9.79□□□□□ -0.84
RNU6-1278P-201ENST00000516130 SPDYE2Q495Y8 402 aa9.79□□□□□ -0.84
RNU6-1278P-201ENST00000516130 SLC4A1APQ9BWU0 796 aaKnown RBP9.76□□□□□ -0.85
RNU6-1278P-201ENST00000516130 C19orf67A6NJJ6 358 aa9.75□□□□□ -0.85
RNU6-1278P-201ENST00000516130 PRKAR2AP13861 404 aaKnown RBP9.74□□□□□ -0.85
RNU6-1278P-201ENST00000516130 SPDYE1Q8NFV5 336 aaPredicted RBP9.71□□□□□ -0.86
RNU6-1278P-201ENST00000516130 ATXN8OSP0DMR3 200 aa9.69□□□□□ -0.86
RNU6-1278P-201ENST00000516130 LHX8Q68G74 356 aa9.69□□□□□ -0.86
RNU6-1278P-201ENST00000516130 GABBR2O75899 941 aa9.68□□□□□ -0.86
RNU6-1278P-201ENST00000516130 FBLN2P98095 1184 aa9.67□□□□□ -0.86
RNU6-1278P-201ENST00000516130 CLEC11AQ9Y240 323 aa9.64□□□□□ -0.87
RNU6-1278P-201ENST00000516130 SSUH2Q9Y2M2 353 aa9.62□□□□□ -0.87
RNU6-1278P-201ENST00000516130 ZBTB22O15209 634 aa9.6□□□□□ -0.87
RNU6-1278P-201ENST00000516130 MKRN4PQ13434 485 aaPredicted RBP9.55□□□□□ -0.88
RNU6-1278P-201ENST00000516130 ZNF692Q9BU19 519 aaPredicted RBP9.55□□□□□ -0.88
RNU6-1278P-201ENST00000516130 CHADLQ6NUI6 762 aa9.51□□□□□ -0.89
RNU6-1278P-201ENST00000516130 POTEIP0CG38 1075 aa9.48□□□□□ -0.89
RNU6-1278P-201ENST00000516130 CLCN6P51797 869 aa9.47□□□□□ -0.89
RNU6-1278P-201ENST00000516130 PRR29P0C7W0 189 aa9.46□□□□□ -0.9
RNU6-1278P-201ENST00000516130 CD44P16070 742 aaKnown RBP9.42□□□□□ -0.9
RNU6-1278P-201ENST00000516130 PABPN1Q86U42 306 aaKnown RBP eCLIP9.39□□□□□ -0.91
RNU6-1278P-201ENST00000516130 FARP1Q9Y4F1 1045 aaPredicted RBP9.38□□□□□ -0.91
RNU6-1278P-201ENST00000516130 PLSCR2Q9NRY7 297 aa9.37□□□□□ -0.91
RNU6-1278P-201ENST00000516130 DCBLD2Q96PD2 775 aa9.31□□□□□ -0.92
RNU6-1278P-201ENST00000516130 ZNF579Q8NAF0 562 aaKnown RBP9.3□□□□□ -0.92
RNU6-1278P-201ENST00000516130 OTUD5Q96G74 571 aa9.21□□□□□ -0.94
RNU6-1278P-201ENST00000516130 ZRANB1Q9UGI0 708 aa9.19□□□□□ -0.94
RNU6-1278P-201ENST00000516130 GALR2O43603 387 aaPredicted RBP9.16□□□□□ -0.94
RNU6-1278P-201ENST00000516130 POTEMA6NI47 508 aa9.14□□□□□ -0.95
RNU6-1278P-201ENST00000516130 POTEB2H3BUK9 544 aa9.14□□□□□ -0.95
RNU6-1278P-201ENST00000516130 CREBZFQ9NS37 354 aa9.14□□□□□ -0.95
RNU6-1278P-201ENST00000516130 POTEGQ6S5H5 508 aa9.1□□□□□ -0.95
RNU6-1278P-201ENST00000516130 PCDH10Q9P2E7 1040 aa9.09□□□□□ -0.95
RNU6-1278P-201ENST00000516130 STAG3Q9UJ98 1225 aa9.09□□□□□ -0.95
RNU6-1278P-201ENST00000516130 PAK3O75914 559 aaPredicted RBP9.05□□□□□ -0.96
RNU6-1278P-201ENST00000516130 PELP1Q8IZL8 1130 aaKnown RBP9.03□□□□□ -0.96
RNU6-1278P-201ENST00000516130 PHF12Q96QT6 1004 aa9.03□□□□□ -0.96
RNU6-1278P-201ENST00000516130 ASTLQ6HA08 431 aaPredicted RBP8.99□□□□□ -0.97
RNU6-1278P-201ENST00000516130 C7P10643 843 aa8.97□□□□□ -0.97
RNU6-1278P-201ENST00000516130 METRNQ9UJH8 293 aa8.97□□□□□ -0.97
RNU6-1278P-201ENST00000516130 NPM1P06748 294 aaKnown RBP eCLIP8.96□□□□□ -0.98
RNU6-1278P-201ENST00000516130 POTEJP0CG39 1038 aa8.96□□□□□ -0.98
RNU6-1278P-201ENST00000516130 MNX1P50219 401 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms