Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.03□□□□□ -1.92
LMO4P61968 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LMO4P61968 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LMO4P61968 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LMO4P61968 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.03□□□□□ -1.92
LMO4P61968 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LMO4P61968 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LMO4P61968 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.03□□□□□ -1.92
LMO4P61968 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LMO4P61968 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.03□□□□□ -1.92
LMO4P61968 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LMO4P61968 Y_RNA.9-201ENST00000362354 101 ntBASIC3.03□□□□□ -1.92
LMO4P61968 RNU6-777P-201ENST00000364265 104 ntBASIC3.03□□□□□ -1.92
LMO4P61968 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.03□□□□□ -1.92
LMO4P61968 SNORA51.6-201ENST00000384151 125 ntBASIC3.03□□□□□ -1.92
LMO4P61968 RPL31P1-201ENST00000398116 372 ntBASIC3.03□□□□□ -1.92
LMO4P61968 FGF7P8-201ENST00000402994 292 ntBASIC3.03□□□□□ -1.92
LMO4P61968 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.03□□□□□ -1.92
LMO4P61968 RNU4-78P-201ENST00000410940 126 ntBASIC3.03□□□□□ -1.92
LMO4P61968 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.03□□□□□ -1.92
LMO4P61968 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.03□□□□□ -1.92
LMO4P61968 MTATP6P27-201ENST00000416987 621 ntBASIC3.03□□□□□ -1.92
LMO4P61968 C1DP2-201ENST00000418167 426 ntBASIC3.03□□□□□ -1.92
LMO4P61968 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.03□□□□□ -1.92
LMO4P61968 AP000907.1-201ENST00000428428 510 ntBASIC3.03□□□□□ -1.92
LMO4P61968 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.03□□□□□ -1.92
LMO4P61968 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.03□□□□□ -1.92
LMO4P61968 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.03□□□□□ -1.92
LMO4P61968 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.03□□□□□ -1.92
LMO4P61968 ATP5HP2-201ENST00000433885 485 ntBASIC3.03□□□□□ -1.92
LMO4P61968 AC073063.1-201ENST00000434352 607 ntBASIC3.03□□□□□ -1.92
LMO4P61968 MTND4LP10-201ENST00000435146 291 ntBASIC3.03□□□□□ -1.92
LMO4P61968 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.03□□□□□ -1.92
LMO4P61968 MTCO3P18-201ENST00000440206 761 ntBASIC3.03□□□□□ -1.92
LMO4P61968 PGBD4P3-201ENST00000440731 581 ntBASIC3.03□□□□□ -1.92
LMO4P61968 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.03□□□□□ -1.92
LMO4P61968 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.03□□□□□ -1.92
LMO4P61968 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.03□□□□□ -1.92
LMO4P61968 snoU13.3-201ENST00000459441 104 ntBASIC3.03□□□□□ -1.92
LMO4P61968 AC010469.1-201ENST00000463864 576 ntBASIC3.03□□□□□ -1.92
LMO4P61968 PLGLA-201ENST00000465668 449 ntBASIC3.03□□□□□ -1.92
LMO4P61968 TRBV12-2-201ENST00000489763 344 ntBASIC3.03□□□□□ -1.92
LMO4P61968 AC025445.1-201ENST00000502728 300 ntBASIC3.03□□□□□ -1.92
LMO4P61968 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.03□□□□□ -1.92
LMO4P61968 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
LMO4P61968 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.03□□□□□ -1.92
LMO4P61968 AC108078.1-201ENST00000508073 725 ntBASIC3.03□□□□□ -1.92
LMO4P61968 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.03□□□□□ -1.92
LMO4P61968 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.03□□□□□ -1.92
LMO4P61968 AC093809.1-201ENST00000509155 340 ntBASIC3.03□□□□□ -1.92
LMO4P61968 AC005921.1-201ENST00000510589 286 ntBASIC3.03□□□□□ -1.92
LMO4P61968 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LMO4P61968 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.03□□□□□ -1.92
LMO4P61968 AC010342.1-201ENST00000514047 877 ntBASIC3.03□□□□□ -1.92
LMO4P61968 MTND5P4-201ENST00000514978 288 ntBASIC3.03□□□□□ -1.92
LMO4P61968 RNA5SP154-201ENST00000516193 111 ntBASIC3.03□□□□□ -1.92
LMO4P61968 MTCO2P4-201ENST00000517968 247 ntBASIC3.03□□□□□ -1.92
LMO4P61968 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LMO4P61968 AP004247.1-201ENST00000531556 1289 ntBASIC3.03□□□□□ -1.92
LMO4P61968 AC008011.1-201ENST00000545989 227 ntBASIC3.03□□□□□ -1.92
LMO4P61968 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.03□□□□□ -1.92
LMO4P61968 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.03□□□□□ -1.92
LMO4P61968 AP000907.4-201ENST00000604143 237 ntBASIC3.03□□□□□ -1.92
LMO4P61968 AC112187.2-201ENST00000604345 283 ntBASIC3.03□□□□□ -1.92
LMO4P61968 TUG1_1.1-201ENST00000610654 145 ntBASIC3.03□□□□□ -1.92
LMO4P61968 AC243773.3-201ENST00000613270 256 ntBASIC3.03□□□□□ -1.92
LMO4P61968 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LMO4P61968 AC108479.2-201ENST00000617314 601 ntBASIC3.03□□□□□ -1.92
LMO4P61968 AC136475.10-201ENST00000620253 385 ntBASIC3.03□□□□□ -1.92
LMO4P61968 AC099654.10-201ENST00000640395 161 ntBASIC3.03□□□□□ -1.92
LMO4P61968 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
LMO4P61968 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LMO4P61968 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.03□□□□□ -1.92
LMO4P61968 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LMO4P61968 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.03□□□□□ -1.92
LMO4P61968 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LMO4P61968 AC018529.3-201ENST00000624212 2254 ntBASIC3.03□□□□□ -1.92
LMO4P61968 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.93
LMO4P61968 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
LMO4P61968 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
LMO4P61968 AL365440.1-201ENST00000436135 2167 ntBASIC3.02□□□□□ -1.93
LMO4P61968 AL049781.1-201ENST00000623195 3585 ntBASIC3.02□□□□□ -1.93
LMO4P61968 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LMO4P61968 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LMO4P61968 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
LMO4P61968 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
LMO4P61968 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.02□□□□□ -1.93
LMO4P61968 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.02□□□□□ -1.93
LMO4P61968 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LMO4P61968 RNA5SP72-201ENST00000364442 117 ntBASIC3.02□□□□□ -1.93
LMO4P61968 SNORA7.2-201ENST00000364446 145 ntBASIC3.02□□□□□ -1.93
LMO4P61968 RNU6-809P-201ENST00000384461 107 ntBASIC3.02□□□□□ -1.93
LMO4P61968 MIR93-201ENST00000385024 80 ntBASIC3.02□□□□□ -1.93
LMO4P61968 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
LMO4P61968 RNU6-780P-201ENST00000391030 104 ntBASIC3.02□□□□□ -1.93
LMO4P61968 MTCO3P40-201ENST00000392516 676 ntBASIC3.02□□□□□ -1.93
LMO4P61968 AL590002.1-201ENST00000406554 418 ntBASIC3.02□□□□□ -1.93
LMO4P61968 RPS3AP3-201ENST00000411933 242 ntBASIC3.02□□□□□ -1.93
LMO4P61968 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
LMO4P61968 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms