Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
CD44P16070 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
CD44P16070 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CD44P16070 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
CD44P16070 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.99□□□□□ -1.29
CD44P16070 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
CD44P16070 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
CD44P16070 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CD44P16070 AP001284.1-201ENST00000528393 2118 ntBASIC6.98□□□□□ -1.29
CD44P16070 AC016745.2-201ENST00000608834 3443 ntBASIC6.98□□□□□ -1.29
CD44P16070 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
CD44P16070 LCOR-201ENST00000286067 4542 ntBASIC6.98□□□□□ -1.29
CD44P16070 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
CD44P16070 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.98□□□□□ -1.29
CD44P16070 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CD44P16070 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC6.98□□□□□ -1.29
CD44P16070 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
CD44P16070 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.98□□□□□ -1.29
CD44P16070 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CD44P16070 MIR412-201ENST00000362142 91 ntBASIC6.98□□□□□ -1.29
CD44P16070 RNU6-336P-201ENST00000364891 107 ntBASIC6.98□□□□□ -1.29
CD44P16070 RNA5SP85-201ENST00000365378 119 ntBASIC6.98□□□□□ -1.29
CD44P16070 MIR433-201ENST00000384837 93 ntBASIC6.98□□□□□ -1.29
CD44P16070 MIR135A2-201ENST00000384854 100 ntBASIC6.98□□□□□ -1.29
CD44P16070 RNA5SP155-201ENST00000411154 129 ntBASIC6.98□□□□□ -1.29
CD44P16070 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
CD44P16070 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.98□□□□□ -1.29
CD44P16070 H3F3BP1-201ENST00000440551 403 ntBASIC6.98□□□□□ -1.29
CD44P16070 VPS25P1-201ENST00000455691 508 ntBASIC6.98□□□□□ -1.29
CD44P16070 snoU13.7-201ENST00000459220 104 ntBASIC6.98□□□□□ -1.29
CD44P16070 RN7SL799P-201ENST00000475891 298 ntBASIC6.98□□□□□ -1.29
CD44P16070 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC6.98□□□□□ -1.29
CD44P16070 AC006445.2-201ENST00000510061 472 ntBASIC6.98□□□□□ -1.29
CD44P16070 RNU6-377P-201ENST00000515965 102 ntBASIC6.98□□□□□ -1.29
CD44P16070 RPL7AP69-201ENST00000595306 806 ntBASIC6.98□□□□□ -1.29
CD44P16070 AC234771.5-201ENST00000600161 514 ntBASIC6.98□□□□□ -1.29
CD44P16070 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.98□□□□□ -1.29
CD44P16070 AC004467.1-201ENST00000615678 330 ntBASIC6.98□□□□□ -1.29
CD44P16070 AC099669.2-201ENST00000616549 437 ntBASIC6.98□□□□□ -1.29
CD44P16070 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.98□□□□□ -1.29
CD44P16070 AC091932.3-201ENST00000624223 323 ntBASIC6.98□□□□□ -1.29
CD44P16070 AL162377.2-201ENST00000624532 337 ntBASIC6.98□□□□□ -1.29
CD44P16070 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CD44P16070 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CD44P16070 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CD44P16070 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CD44P16070 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
CD44P16070 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.98□□□□□ -1.29
CD44P16070 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
CD44P16070 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CD44P16070 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.98□□□□□ -1.29
CD44P16070 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CD44P16070 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.98□□□□□ -1.29
CD44P16070 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
CD44P16070 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
CD44P16070 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.97□□□□□ -1.29
CD44P16070 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
CD44P16070 AC097461.1-201ENST00000568928 2821 ntBASIC6.97□□□□□ -1.29
CD44P16070 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CD44P16070 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.97□□□□□ -1.29
CD44P16070 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
CD44P16070 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.97□□□□□ -1.29
CD44P16070 SNORA17.1-201ENST00000362945 126 ntBASIC6.97□□□□□ -1.29
CD44P16070 SNORD14B-201ENST00000364533 90 ntBASIC6.97□□□□□ -1.29
CD44P16070 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
CD44P16070 RNU6-1228P-201ENST00000391014 107 ntBASIC6.97□□□□□ -1.29
CD44P16070 AL606845.1-201ENST00000404881 255 ntBASIC6.97□□□□□ -1.29
CD44P16070 HMGA1P8-201ENST00000414130 321 ntBASIC6.97□□□□□ -1.29
CD44P16070 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.97□□□□□ -1.29
CD44P16070 CYCSP32-201ENST00000440548 321 ntBASIC6.97□□□□□ -1.29
CD44P16070 ENSA-210ENST00000503241 574 ntTSL 3 BASIC6.97□□□□□ -1.29
CD44P16070 AC008945.1-201ENST00000505144 499 ntBASIC6.97□□□□□ -1.29
CD44P16070 AC006499.3-201ENST00000506077 748 ntBASIC6.97□□□□□ -1.29
CD44P16070 AC020593.1-201ENST00000507399 299 ntBASIC6.97□□□□□ -1.29
CD44P16070 AC006199.1-201ENST00000548728 219 ntBASIC6.97□□□□□ -1.29
CD44P16070 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC6.97□□□□□ -1.29
CD44P16070 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.97□□□□□ -1.29
CD44P16070 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.97□□□□□ -1.29
CD44P16070 AC005191.1-201ENST00000603950 358 ntBASIC6.97□□□□□ -1.29
CD44P16070 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.97□□□□□ -1.29
CD44P16070 U1.34-201ENST00000618578 162 ntBASIC6.97□□□□□ -1.29
CD44P16070 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.97□□□□□ -1.29
CD44P16070 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC6.97□□□□□ -1.29
CD44P16070 AC093671.1-201ENST00000624981 2929 ntBASIC6.97□□□□□ -1.29
CD44P16070 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.97□□□□□ -1.29
CD44P16070 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CD44P16070 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.97□□□□□ -1.29
CD44P16070 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CD44P16070 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.97□□□□□ -1.29
CD44P16070 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CD44P16070 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
CD44P16070 OR2AH1P-202ENST00000641232 2744 ntBASIC6.97□□□□□ -1.29
CD44P16070 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CD44P16070 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
CD44P16070 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.97□□□□□ -1.29
CD44P16070 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CD44P16070 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.96□□□□□ -1.29
CD44P16070 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.96□□□□□ -1.29
CD44P16070 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CD44P16070 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms