Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AL355810.1-201ENST00000614629 552 ntBASIC1.83□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC018926.3-201ENST00000618841 406 ntBASIC1.83□□□□□ -2.12
TCRBV4S1A1TA0A5B7 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC006020.1-201ENST00000420179 1854 ntBASIC1.83□□□□□ -2.12
TCRBV4S1A1TA0A5B7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
TCRBV4S1A1TA0A5B7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.83□□□□□ -2.12
TCRBV4S1A1TA0A5B7 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
TCRBV4S1A1TA0A5B7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AL139276.1-201ENST00000311910 1001 ntBASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 RNU6-1249P-201ENST00000363237 111 ntBASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 RNU6-253P-201ENST00000384730 105 ntBASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 SSXP10-201ENST00000402595 565 ntBASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 BTF3P7-201ENST00000407097 488 ntBASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 RN7SKP140-201ENST00000411196 284 ntBASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 RPS3AP9-201ENST00000417027 792 ntBASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AL121890.1-201ENST00000435457 205 ntBASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC068135.1-201ENST00000446164 246 ntBASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 MTCYBP20-201ENST00000524239 1129 ntBASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AP001317.1-201ENST00000531194 960 ntBASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AP000889.2-201ENST00000532684 490 ntBASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC090312.2-201ENST00000582687 378 ntBASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 CBX3P2-202ENST00000583365 535 ntBASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AP001330.4-201ENST00000604350 154 ntBASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
TCRBV4S1A1TA0A5B7 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC026241.1-201ENST00000517873 2142 ntBASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 RN7SKP223-201ENST00000410582 62 ntBASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC092447.6-201ENST00000414578 210 ntBASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 MTND1P23-201ENST00000416931 372 ntBASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AL513477.1-202ENST00000417061 214 ntBASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 FNDC3CP-201ENST00000420795 1155 ntBASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC010095.1-201ENST00000443543 144 ntBASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AL031659.1-201ENST00000447075 539 ntBASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 RPS29P21-201ENST00000496272 170 ntBASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC104057.1-201ENST00000515547 497 ntBASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 RNU1-41P-201ENST00000516161 162 ntBASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 RNU1-48P-201ENST00000516400 162 ntBASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 HMGB1P46-201ENST00000520062 610 ntBASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 SNRPGP16-201ENST00000533275 226 ntBASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 ISCA1P3-201ENST00000577104 373 ntBASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 MIR4648-201ENST00000580107 72 ntBASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 GLUD1P4-201ENST00000590914 418 ntBASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC025588.3-201ENST00000604182 274 ntBASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC013468.1-201ENST00000608680 598 ntBASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC008083.4-201ENST00000615076 444 ntBASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 MIR6076-201ENST00000617521 113 ntBASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC009159.1-201ENST00000618386 642 ntBASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 MIR6766-201ENST00000622641 72 ntBASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 LINC00216-201ENST00000623548 1126 ntBASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC103798.2-201ENST00000624292 632 ntBASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 BX649567.1-201ENST00000642071 1134 ntBASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.81□□□□□ -2.12
TCRBV4S1A1TA0A5B7 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.8□□□□□ -2.12
TCRBV4S1A1TA0A5B7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TCRBV4S1A1TA0A5B7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
TCRBV4S1A1TA0A5B7 ZNF720P1-201ENST00000562403 1939 ntBASIC1.8□□□□□ -2.12
TCRBV4S1A1TA0A5B7 SNORA67.1-201ENST00000364749 141 ntBASIC1.8□□□□□ -2.12
TCRBV4S1A1TA0A5B7 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
TCRBV4S1A1TA0A5B7 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
TCRBV4S1A1TA0A5B7 RPS4XP3-201ENST00000398541 413 ntBASIC1.8□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AL591416.1-201ENST00000404015 867 ntBASIC1.8□□□□□ -2.12
TCRBV4S1A1TA0A5B7 MORF4L1P6-201ENST00000418771 268 ntBASIC1.8□□□□□ -2.12
TCRBV4S1A1TA0A5B7 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.8□□□□□ -2.12
TCRBV4S1A1TA0A5B7 RPL7P37-201ENST00000425095 738 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms