Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 RNU6-84P-201ENST00000607737 102 ntBASIC7.54□□□□□ -1.2
RNF39Q9H2S5 AC211486.4-201ENST00000621495 113 ntBASIC7.54□□□□□ -1.2
RNF39Q9H2S5 AL592437.2-201ENST00000421655 2434 ntBASIC7.54□□□□□ -1.2
RNF39Q9H2S5 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RNF39Q9H2S5 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RNF39Q9H2S5 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RNF39Q9H2S5 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RNF39Q9H2S5 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RNF39Q9H2S5 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC7.54□□□□□ -1.2
RNF39Q9H2S5 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RNF39Q9H2S5 AC004158.1-201ENST00000564508 4319 ntBASIC7.54□□□□□ -1.2
RNF39Q9H2S5 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.53□□□□□ -1.2
RNF39Q9H2S5 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF39Q9H2S5 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF39Q9H2S5 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC7.53□□□□□ -1.2
RNF39Q9H2S5 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC7.53□□□□□ -1.2
RNF39Q9H2S5 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF39Q9H2S5 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
RNF39Q9H2S5 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF39Q9H2S5 OR5M2P-202ENST00000641241 4242 ntBASIC7.53□□□□□ -1.2
RNF39Q9H2S5 AL359263.1-201ENST00000441188 2796 ntBASIC7.53□□□□□ -1.2
RNF39Q9H2S5 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF39Q9H2S5 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RNF39Q9H2S5 RNA5SP172-201ENST00000365061 118 ntBASIC7.53□□□□□ -1.2
RNF39Q9H2S5 MIR551B-201ENST00000384984 96 ntBASIC7.53□□□□□ -1.2
RNF39Q9H2S5 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF39Q9H2S5 AC000089.1-201ENST00000424559 801 ntBASIC7.53□□□□□ -1.2
RNF39Q9H2S5 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.53□□□□□ -1.2
RNF39Q9H2S5 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF39Q9H2S5 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF39Q9H2S5 AC025281.1-201ENST00000567026 265 ntBASIC7.53□□□□□ -1.2
RNF39Q9H2S5 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
RNF39Q9H2S5 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.53□□□□□ -1.2
RNF39Q9H2S5 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF39Q9H2S5 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF39Q9H2S5 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF39Q9H2S5 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RNF39Q9H2S5 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.53□□□□□ -1.2
RNF39Q9H2S5 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF39Q9H2S5 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF39Q9H2S5 LRRC37A12P-201ENST00000454917 1801 ntBASIC7.52□□□□□ -1.2
RNF39Q9H2S5 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
RNF39Q9H2S5 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 RNA5SP382-201ENST00000363355 112 ntBASIC7.52□□□□□ -1.21
RNF39Q9H2S5 RNU6-296P-201ENST00000384608 107 ntBASIC7.52□□□□□ -1.21
RNF39Q9H2S5 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 RN7SKP156-201ENST00000410308 342 ntBASIC7.52□□□□□ -1.21
RNF39Q9H2S5 RPL36AP10-201ENST00000421785 322 ntBASIC7.52□□□□□ -1.21
RNF39Q9H2S5 AC078809.1-201ENST00000427601 140 ntBASIC7.52□□□□□ -1.21
RNF39Q9H2S5 AL121578.2-201ENST00000448797 447 ntBASIC7.52□□□□□ -1.21
RNF39Q9H2S5 AC093878.1-201ENST00000515630 432 ntBASIC7.52□□□□□ -1.21
RNF39Q9H2S5 IGLVVII-41-1-201ENST00000518405 151 ntBASIC7.52□□□□□ -1.21
RNF39Q9H2S5 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 MFSD8-219ENST00000641228 2559 ntBASIC7.52□□□□□ -1.21
RNF39Q9H2S5 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC7.52□□□□□ -1.21
RNF39Q9H2S5 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RNF39Q9H2S5 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RNF39Q9H2S5 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
RNF39Q9H2S5 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.51□□□□□ -1.21
RNF39Q9H2S5 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
RNF39Q9H2S5 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
RNF39Q9H2S5 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RNF39Q9H2S5 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
RNF39Q9H2S5 COL6A4P1-202ENST00000487147 4317 ntBASIC7.51□□□□□ -1.21
RNF39Q9H2S5 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.21
RNF39Q9H2S5 RN7SKP184-201ENST00000362348 333 ntBASIC7.51□□□□□ -1.21
RNF39Q9H2S5 RNU6-1292P-201ENST00000383856 107 ntBASIC7.51□□□□□ -1.21
RNF39Q9H2S5 Y_RNA.507-201ENST00000384500 99 ntBASIC7.51□□□□□ -1.21
RNF39Q9H2S5 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.51□□□□□ -1.21
RNF39Q9H2S5 KF459542.1-201ENST00000450908 553 ntBASIC7.51□□□□□ -1.21
RNF39Q9H2S5 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC7.51□□□□□ -1.21
RNF39Q9H2S5 RPL7AP23-201ENST00000482625 776 ntBASIC7.51□□□□□ -1.21
RNF39Q9H2S5 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC7.51□□□□□ -1.21
RNF39Q9H2S5 RPS26P48-201ENST00000491713 339 ntBASIC7.51□□□□□ -1.21
RNF39Q9H2S5 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.51□□□□□ -1.21
RNF39Q9H2S5 RNU6-126P-201ENST00000516685 103 ntBASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms