Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
BIVM-ERCC5R4GMW8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
BIVM-ERCC5R4GMW8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC31.95■■■□□ 2.71
BIVM-ERCC5R4GMW8 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC31.95■■■□□ 2.71
BIVM-ERCC5R4GMW8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
BIVM-ERCC5R4GMW8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.71
BIVM-ERCC5R4GMW8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC31.95■■■□□ 2.71
BIVM-ERCC5R4GMW8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
BIVM-ERCC5R4GMW8 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.71
BIVM-ERCC5R4GMW8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC31.95■■■□□ 2.71
BIVM-ERCC5R4GMW8 AL391422.3-201ENST00000603791 2761 ntBASIC31.95■■■□□ 2.71
BIVM-ERCC5R4GMW8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
BIVM-ERCC5R4GMW8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
BIVM-ERCC5R4GMW8 MCCD1P1-208ENST00000445732 328 ntBASIC31.95■■■□□ 2.71
BIVM-ERCC5R4GMW8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
BIVM-ERCC5R4GMW8 PRELID1P1-202ENST00000567272 903 ntBASIC31.95■■■□□ 2.71
BIVM-ERCC5R4GMW8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
BIVM-ERCC5R4GMW8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC31.95■■■□□ 2.71
BIVM-ERCC5R4GMW8 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
BIVM-ERCC5R4GMW8 AL162741.1-201ENST00000565563 1558 ntBASIC31.95■■■□□ 2.71
BIVM-ERCC5R4GMW8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC31.95■■■□□ 2.7
BIVM-ERCC5R4GMW8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
BIVM-ERCC5R4GMW8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
BIVM-ERCC5R4GMW8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC31.94■■■□□ 2.7
BIVM-ERCC5R4GMW8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC31.94■■■□□ 2.7
BIVM-ERCC5R4GMW8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
BIVM-ERCC5R4GMW8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC31.94■■■□□ 2.7
BIVM-ERCC5R4GMW8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
BIVM-ERCC5R4GMW8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
BIVM-ERCC5R4GMW8 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC31.94■■■□□ 2.7
BIVM-ERCC5R4GMW8 AC024243.1-201ENST00000609234 778 ntBASIC31.94■■■□□ 2.7
BIVM-ERCC5R4GMW8 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC31.94■■■□□ 2.7
BIVM-ERCC5R4GMW8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC31.94■■■□□ 2.7
BIVM-ERCC5R4GMW8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
BIVM-ERCC5R4GMW8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
BIVM-ERCC5R4GMW8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
BIVM-ERCC5R4GMW8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC31.94■■■□□ 2.7
BIVM-ERCC5R4GMW8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
BIVM-ERCC5R4GMW8 KRT8P3-201ENST00000519669 1449 ntBASIC31.94■■■□□ 2.7
BIVM-ERCC5R4GMW8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC31.93■■■□□ 2.7
BIVM-ERCC5R4GMW8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC31.93■■■□□ 2.7
BIVM-ERCC5R4GMW8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
BIVM-ERCC5R4GMW8 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
BIVM-ERCC5R4GMW8 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC31.93■■■□□ 2.7
BIVM-ERCC5R4GMW8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC31.93■■■□□ 2.7
BIVM-ERCC5R4GMW8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
BIVM-ERCC5R4GMW8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
BIVM-ERCC5R4GMW8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC31.93■■■□□ 2.7
BIVM-ERCC5R4GMW8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
BIVM-ERCC5R4GMW8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
BIVM-ERCC5R4GMW8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
BIVM-ERCC5R4GMW8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC31.93■■■□□ 2.7
BIVM-ERCC5R4GMW8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC31.93■■■□□ 2.7
BIVM-ERCC5R4GMW8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC31.93■■■□□ 2.7
BIVM-ERCC5R4GMW8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC31.93■■■□□ 2.7
BIVM-ERCC5R4GMW8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC31.93■■■□□ 2.7
BIVM-ERCC5R4GMW8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC31.93■■■□□ 2.7
BIVM-ERCC5R4GMW8 AL121672.3-201ENST00000608644 468 ntBASIC31.93■■■□□ 2.7
BIVM-ERCC5R4GMW8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
BIVM-ERCC5R4GMW8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
BIVM-ERCC5R4GMW8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
BIVM-ERCC5R4GMW8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC31.92■■■□□ 2.7
BIVM-ERCC5R4GMW8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
BIVM-ERCC5R4GMW8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC31.92■■■□□ 2.7
BIVM-ERCC5R4GMW8 CHCHD2P8-201ENST00000429873 447 ntBASIC31.92■■■□□ 2.7
BIVM-ERCC5R4GMW8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC31.92■■■□□ 2.7
BIVM-ERCC5R4GMW8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
BIVM-ERCC5R4GMW8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
BIVM-ERCC5R4GMW8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
BIVM-ERCC5R4GMW8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
BIVM-ERCC5R4GMW8 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
BIVM-ERCC5R4GMW8 TSSC2-201ENST00000450217 709 ntBASIC31.91■■■□□ 2.7
BIVM-ERCC5R4GMW8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC31.91■■■□□ 2.7
BIVM-ERCC5R4GMW8 MIR3917-201ENST00000580971 93 ntBASIC31.91■■■□□ 2.7
BIVM-ERCC5R4GMW8 RN7SL510P-201ENST00000581311 263 ntBASIC31.91■■■□□ 2.7
BIVM-ERCC5R4GMW8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
BIVM-ERCC5R4GMW8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC31.91■■■□□ 2.7
BIVM-ERCC5R4GMW8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
BIVM-ERCC5R4GMW8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
BIVM-ERCC5R4GMW8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
BIVM-ERCC5R4GMW8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
BIVM-ERCC5R4GMW8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
BIVM-ERCC5R4GMW8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
BIVM-ERCC5R4GMW8 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
BIVM-ERCC5R4GMW8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
BIVM-ERCC5R4GMW8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC31.9■■■□□ 2.7
BIVM-ERCC5R4GMW8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC31.9■■■□□ 2.7
BIVM-ERCC5R4GMW8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC31.9■■■□□ 2.7
BIVM-ERCC5R4GMW8 AL136038.4-201ENST00000603606 1261 ntBASIC31.9■■■□□ 2.7
BIVM-ERCC5R4GMW8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
BIVM-ERCC5R4GMW8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
BIVM-ERCC5R4GMW8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
BIVM-ERCC5R4GMW8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
BIVM-ERCC5R4GMW8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC31.89■■■□□ 2.7
BIVM-ERCC5R4GMW8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC31.89■■■□□ 2.7
BIVM-ERCC5R4GMW8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC31.89■■■□□ 2.7
BIVM-ERCC5R4GMW8 MIR3652-201ENST00000579335 131 ntBASIC31.89■■■□□ 2.7
BIVM-ERCC5R4GMW8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
BIVM-ERCC5R4GMW8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
BIVM-ERCC5R4GMW8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC31.89■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms