Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC22.72■■□□□ 1.23
CYP46A1Q9Y6A2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CYP46A1Q9Y6A2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
CYP46A1Q9Y6A2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CYP46A1Q9Y6A2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CYP46A1Q9Y6A2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
CYP46A1Q9Y6A2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CYP46A1Q9Y6A2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC22.72■■□□□ 1.23
CYP46A1Q9Y6A2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CYP46A1Q9Y6A2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CYP46A1Q9Y6A2 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CYP46A1Q9Y6A2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
CYP46A1Q9Y6A2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CYP46A1Q9Y6A2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CYP46A1Q9Y6A2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CYP46A1Q9Y6A2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC22.71■■□□□ 1.23
CYP46A1Q9Y6A2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
CYP46A1Q9Y6A2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CYP46A1Q9Y6A2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CYP46A1Q9Y6A2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CYP46A1Q9Y6A2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.71■■□□□ 1.23
CYP46A1Q9Y6A2 AC006058.3-201ENST00000606217 1069 ntBASIC22.71■■□□□ 1.23
CYP46A1Q9Y6A2 AC124016.1-201ENST00000609552 612 ntBASIC22.71■■□□□ 1.23
CYP46A1Q9Y6A2 AC073648.6-201ENST00000641589 218 ntBASIC22.71■■□□□ 1.23
CYP46A1Q9Y6A2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CYP46A1Q9Y6A2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CYP46A1Q9Y6A2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
CYP46A1Q9Y6A2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CYP46A1Q9Y6A2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CYP46A1Q9Y6A2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CYP46A1Q9Y6A2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CYP46A1Q9Y6A2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CYP46A1Q9Y6A2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CYP46A1Q9Y6A2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
CYP46A1Q9Y6A2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
CYP46A1Q9Y6A2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
CYP46A1Q9Y6A2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC22.7■■□□□ 1.22
CYP46A1Q9Y6A2 AC133681.1-201ENST00000465482 601 ntBASIC22.7■■□□□ 1.22
CYP46A1Q9Y6A2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.7■■□□□ 1.22
CYP46A1Q9Y6A2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC22.7■■□□□ 1.22
CYP46A1Q9Y6A2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC22.7■■□□□ 1.22
CYP46A1Q9Y6A2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CYP46A1Q9Y6A2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CYP46A1Q9Y6A2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
CYP46A1Q9Y6A2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CYP46A1Q9Y6A2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC22.7■■□□□ 1.22
CYP46A1Q9Y6A2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CYP46A1Q9Y6A2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
CYP46A1Q9Y6A2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CYP46A1Q9Y6A2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CYP46A1Q9Y6A2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CYP46A1Q9Y6A2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CYP46A1Q9Y6A2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CYP46A1Q9Y6A2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CYP46A1Q9Y6A2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
CYP46A1Q9Y6A2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC22.69■■□□□ 1.22
CYP46A1Q9Y6A2 TSPY21P-201ENST00000433481 731 ntBASIC22.69■■□□□ 1.22
CYP46A1Q9Y6A2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC22.69■■□□□ 1.22
CYP46A1Q9Y6A2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CYP46A1Q9Y6A2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CYP46A1Q9Y6A2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
CYP46A1Q9Y6A2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
CYP46A1Q9Y6A2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CYP46A1Q9Y6A2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
CYP46A1Q9Y6A2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CYP46A1Q9Y6A2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CYP46A1Q9Y6A2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CYP46A1Q9Y6A2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CYP46A1Q9Y6A2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 CD99P1-205ENST00000527459 561 ntBASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 AC110285.5-201ENST00000611501 352 ntBASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 AL138781.2-201ENST00000617896 1843 ntBASIC22.68■■□□□ 1.22
CYP46A1Q9Y6A2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CYP46A1Q9Y6A2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CYP46A1Q9Y6A2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CYP46A1Q9Y6A2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms