Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.08■□□□□ 0.49
GPC6Q9Y625 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
GPC6Q9Y625 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
GPC6Q9Y625 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GPC6Q9Y625 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
GPC6Q9Y625 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GPC6Q9Y625 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.08■□□□□ 0.48
GPC6Q9Y625 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GPC6Q9Y625 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
GPC6Q9Y625 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
GPC6Q9Y625 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
GPC6Q9Y625 RNA5SP413-201ENST00000516373 109 ntBASIC18.08■□□□□ 0.48
GPC6Q9Y625 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.08■□□□□ 0.48
GPC6Q9Y625 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.08■□□□□ 0.48
GPC6Q9Y625 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
GPC6Q9Y625 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.08■□□□□ 0.48
GPC6Q9Y625 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
GPC6Q9Y625 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GPC6Q9Y625 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GPC6Q9Y625 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
GPC6Q9Y625 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC6Q9Y625 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
GPC6Q9Y625 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
GPC6Q9Y625 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC6Q9Y625 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GPC6Q9Y625 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC6Q9Y625 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
GPC6Q9Y625 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.07■□□□□ 0.48
GPC6Q9Y625 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC6Q9Y625 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC6Q9Y625 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GPC6Q9Y625 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GPC6Q9Y625 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GPC6Q9Y625 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC6Q9Y625 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.07■□□□□ 0.48
GPC6Q9Y625 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.07■□□□□ 0.48
GPC6Q9Y625 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GPC6Q9Y625 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.07■□□□□ 0.48
GPC6Q9Y625 UNC93B5-201ENST00000530315 699 ntBASIC18.07■□□□□ 0.48
GPC6Q9Y625 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
GPC6Q9Y625 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.07■□□□□ 0.48
GPC6Q9Y625 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC6Q9Y625 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC6Q9Y625 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.07■□□□□ 0.48
GPC6Q9Y625 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
GPC6Q9Y625 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GPC6Q9Y625 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
GPC6Q9Y625 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.07■□□□□ 0.48
GPC6Q9Y625 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
GPC6Q9Y625 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC6Q9Y625 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GPC6Q9Y625 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC6Q9Y625 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GPC6Q9Y625 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC6Q9Y625 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC6Q9Y625 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC6Q9Y625 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
GPC6Q9Y625 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GPC6Q9Y625 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC6Q9Y625 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GPC6Q9Y625 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GPC6Q9Y625 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC6Q9Y625 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC6Q9Y625 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
GPC6Q9Y625 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GPC6Q9Y625 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.06■□□□□ 0.48
GPC6Q9Y625 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.06■□□□□ 0.48
GPC6Q9Y625 AC006557.6-201ENST00000623071 864 ntBASIC18.06■□□□□ 0.48
GPC6Q9Y625 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
GPC6Q9Y625 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC6Q9Y625 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC6Q9Y625 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC6Q9Y625 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GPC6Q9Y625 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
GPC6Q9Y625 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
GPC6Q9Y625 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
GPC6Q9Y625 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
GPC6Q9Y625 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
GPC6Q9Y625 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
GPC6Q9Y625 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GPC6Q9Y625 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.05■□□□□ 0.48
GPC6Q9Y625 PCDHB18P-201ENST00000524813 2368 ntBASIC18.05■□□□□ 0.48
GPC6Q9Y625 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
GPC6Q9Y625 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
GPC6Q9Y625 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GPC6Q9Y625 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.05■□□□□ 0.48
GPC6Q9Y625 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.05■□□□□ 0.48
GPC6Q9Y625 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GPC6Q9Y625 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GPC6Q9Y625 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
GPC6Q9Y625 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GPC6Q9Y625 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.05■□□□□ 0.48
GPC6Q9Y625 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GPC6Q9Y625 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.05■□□□□ 0.48
GPC6Q9Y625 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GPC6Q9Y625 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.05■□□□□ 0.48
GPC6Q9Y625 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.05■□□□□ 0.48
GPC6Q9Y625 SOX15-203ENST00000570788 1093 ntBASIC18.05■□□□□ 0.48
GPC6Q9Y625 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.05■□□□□ 0.48
GPC6Q9Y625 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms