Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 MIR1238-201ENST00000408483 83 ntBASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 AL390955.1-201ENST00000428694 934 ntBASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 KSR1P1-201ENST00000446298 240 ntBASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 RN7SL850P-201ENST00000579959 291 ntBASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 Z82202.1-201ENST00000623446 1880 ntBASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 AC008040.2-201ENST00000461049 708 ntBASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
HRH3Q9Y5N1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HRH3Q9Y5N1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HRH3Q9Y5N1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HRH3Q9Y5N1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.66■□□□□ 0.42
HRH3Q9Y5N1 KRT16P1-201ENST00000399124 1418 ntBASIC17.66■□□□□ 0.42
HRH3Q9Y5N1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HRH3Q9Y5N1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.66■□□□□ 0.42
HRH3Q9Y5N1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
HRH3Q9Y5N1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.66■□□□□ 0.42
HRH3Q9Y5N1 TMPOP1-202ENST00000424642 1267 ntBASIC17.66■□□□□ 0.42
HRH3Q9Y5N1 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.66■□□□□ 0.42
HRH3Q9Y5N1 AC011506.1-201ENST00000474329 610 ntBASIC17.66■□□□□ 0.42
HRH3Q9Y5N1 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.66■□□□□ 0.42
HRH3Q9Y5N1 Z85996.1-201ENST00000494644 937 ntBASIC17.66■□□□□ 0.42
HRH3Q9Y5N1 AC145285.6-201ENST00000604632 637 ntBASIC17.66■□□□□ 0.42
HRH3Q9Y5N1 AC079416.2-201ENST00000625035 1193 ntBASIC17.66■□□□□ 0.42
HRH3Q9Y5N1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.66■□□□□ 0.42
HRH3Q9Y5N1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HRH3Q9Y5N1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HRH3Q9Y5N1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.66■□□□□ 0.42
HRH3Q9Y5N1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HRH3Q9Y5N1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HRH3Q9Y5N1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.66■□□□□ 0.42
HRH3Q9Y5N1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HRH3Q9Y5N1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HRH3Q9Y5N1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.66■□□□□ 0.42
HRH3Q9Y5N1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HRH3Q9Y5N1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HRH3Q9Y5N1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HRH3Q9Y5N1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HRH3Q9Y5N1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.65■□□□□ 0.42
HRH3Q9Y5N1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HRH3Q9Y5N1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HRH3Q9Y5N1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HRH3Q9Y5N1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HRH3Q9Y5N1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HRH3Q9Y5N1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HRH3Q9Y5N1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.65■□□□□ 0.42
HRH3Q9Y5N1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HRH3Q9Y5N1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.65■□□□□ 0.42
HRH3Q9Y5N1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HRH3Q9Y5N1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.65■□□□□ 0.42
HRH3Q9Y5N1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.65■□□□□ 0.42
HRH3Q9Y5N1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.65■□□□□ 0.42
HRH3Q9Y5N1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HRH3Q9Y5N1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.65■□□□□ 0.42
HRH3Q9Y5N1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HRH3Q9Y5N1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
HRH3Q9Y5N1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HRH3Q9Y5N1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.65■□□□□ 0.42
HRH3Q9Y5N1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HRH3Q9Y5N1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.64■□□□□ 0.42
HRH3Q9Y5N1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.64■□□□□ 0.42
HRH3Q9Y5N1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
HRH3Q9Y5N1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HRH3Q9Y5N1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HRH3Q9Y5N1 SDHAP1-207ENST00000440850 2000 ntBASIC17.64■□□□□ 0.41
HRH3Q9Y5N1 AC104417.2-201ENST00000562989 1793 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms