Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSR3Q9UNL2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SSR3Q9UNL2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.08■□□□□ 0.33
SSR3Q9UNL2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SSR3Q9UNL2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SSR3Q9UNL2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.08■□□□□ 0.33
SSR3Q9UNL2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SSR3Q9UNL2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SSR3Q9UNL2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.08■□□□□ 0.32
SSR3Q9UNL2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SSR3Q9UNL2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SSR3Q9UNL2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.08■□□□□ 0.32
SSR3Q9UNL2 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.08■□□□□ 0.32
SSR3Q9UNL2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.08■□□□□ 0.32
SSR3Q9UNL2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSR3Q9UNL2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
SSR3Q9UNL2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSR3Q9UNL2 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSR3Q9UNL2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSR3Q9UNL2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSR3Q9UNL2 AC067852.2-201ENST00000590513 2313 ntBASIC17.08■□□□□ 0.32
SSR3Q9UNL2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SSR3Q9UNL2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.08■□□□□ 0.32
SSR3Q9UNL2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSR3Q9UNL2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSR3Q9UNL2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR3Q9UNL2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.07■□□□□ 0.32
SSR3Q9UNL2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSR3Q9UNL2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR3Q9UNL2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSR3Q9UNL2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR3Q9UNL2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.07■□□□□ 0.32
SSR3Q9UNL2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.07■□□□□ 0.32
SSR3Q9UNL2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR3Q9UNL2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR3Q9UNL2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR3Q9UNL2 MIR939-201ENST00000401314 82 ntBASIC17.07■□□□□ 0.32
SSR3Q9UNL2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.07■□□□□ 0.32
SSR3Q9UNL2 AF213884.3-201ENST00000563833 479 ntBASIC17.07■□□□□ 0.32
SSR3Q9UNL2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR3Q9UNL2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.07■□□□□ 0.32
SSR3Q9UNL2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR3Q9UNL2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SSR3Q9UNL2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SSR3Q9UNL2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR3Q9UNL2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR3Q9UNL2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR3Q9UNL2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSR3Q9UNL2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR3Q9UNL2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.07■□□□□ 0.32
SSR3Q9UNL2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR3Q9UNL2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.06■□□□□ 0.32
SSR3Q9UNL2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR3Q9UNL2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR3Q9UNL2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSR3Q9UNL2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SSR3Q9UNL2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR3Q9UNL2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
SSR3Q9UNL2 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSR3Q9UNL2 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.06■□□□□ 0.32
SSR3Q9UNL2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR3Q9UNL2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SSR3Q9UNL2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SSR3Q9UNL2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SSR3Q9UNL2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSR3Q9UNL2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.06■□□□□ 0.32
SSR3Q9UNL2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
SSR3Q9UNL2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSR3Q9UNL2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SSR3Q9UNL2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR3Q9UNL2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSR3Q9UNL2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms