Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 SLC25A1P4-201ENST00000567977 778 ntBASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPA1Q9UND3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 LIN28AP1-201ENST00000429574 405 ntBASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 AP005242.2-201ENST00000580065 1175 ntBASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.65■□□□□ 0.42
NPIPA1Q9UND3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.64■□□□□ 0.42
NPIPA1Q9UND3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
NPIPA1Q9UND3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NPIPA1Q9UND3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
NPIPA1Q9UND3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.64■□□□□ 0.42
NPIPA1Q9UND3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.64■□□□□ 0.42
NPIPA1Q9UND3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 ATP5G1P1-201ENST00000448724 379 ntBASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 AC011298.2-201ENST00000617989 482 ntBASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 HLA-A-209ENST00000638375 975 ntBASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA1Q9UND3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPA1Q9UND3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPA1Q9UND3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NPIPA1Q9UND3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NPIPA1Q9UND3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms