Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NOTCH3Q9UM47 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.77□□□□□ -0.05
NOTCH3Q9UM47 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.77□□□□□ -0.05
NOTCH3Q9UM47 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
NOTCH3Q9UM47 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NOTCH3Q9UM47 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.77□□□□□ -0.05
NOTCH3Q9UM47 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NOTCH3Q9UM47 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
NOTCH3Q9UM47 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NOTCH3Q9UM47 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NOTCH3Q9UM47 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
NOTCH3Q9UM47 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 MFAP1P1-201ENST00000442257 1255 ntBASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 CLEC4GP1-201ENST00000596555 870 ntBASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 COX11P1-201ENST00000489116 835 ntBASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NOTCH3Q9UM47 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 LINC01006-201ENST00000333319 2292 ntBASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 AL359075.1-203ENST00000462729 1002 ntBASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 AL691432.2-201ENST00000607222 2038 ntBASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 AC007225.1-201ENST00000566331 1836 ntBASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 KRT18P16-201ENST00000510337 1294 ntBASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.75□□□□□ -0.05
NOTCH3Q9UM47 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 LINC01465-201ENST00000408887 1940 ntBASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NOTCH3Q9UM47 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms