Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 MIR6786-201ENST00000616843 113 ntBASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 FSCN1P1-201ENST00000568912 1481 ntBASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
GTF3C4Q9UKN8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GTF3C4Q9UKN8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GTF3C4Q9UKN8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
GTF3C4Q9UKN8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
GTF3C4Q9UKN8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.61■□□□□ 0.89
GTF3C4Q9UKN8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.61■□□□□ 0.89
GTF3C4Q9UKN8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
GTF3C4Q9UKN8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.61■□□□□ 0.89
GTF3C4Q9UKN8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.61■□□□□ 0.89
GTF3C4Q9UKN8 MMP23A-201ENST00000234610 1017 ntBASIC20.61■□□□□ 0.89
GTF3C4Q9UKN8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GTF3C4Q9UKN8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GTF3C4Q9UKN8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GTF3C4Q9UKN8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GTF3C4Q9UKN8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.61■□□□□ 0.89
GTF3C4Q9UKN8 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GTF3C4Q9UKN8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
GTF3C4Q9UKN8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
GTF3C4Q9UKN8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GTF3C4Q9UKN8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.61■□□□□ 0.89
GTF3C4Q9UKN8 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
GTF3C4Q9UKN8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
GTF3C4Q9UKN8 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GTF3C4Q9UKN8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GTF3C4Q9UKN8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.6■□□□□ 0.89
GTF3C4Q9UKN8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GTF3C4Q9UKN8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GTF3C4Q9UKN8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
GTF3C4Q9UKN8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GTF3C4Q9UKN8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
GTF3C4Q9UKN8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.6■□□□□ 0.89
GTF3C4Q9UKN8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.6■□□□□ 0.89
GTF3C4Q9UKN8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.6■□□□□ 0.89
GTF3C4Q9UKN8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.6■□□□□ 0.89
GTF3C4Q9UKN8 AC133561.5-201ENST00000635547 218 ntBASIC20.6■□□□□ 0.89
GTF3C4Q9UKN8 ZNF815P-204ENST00000434898 1737 ntBASIC20.6■□□□□ 0.89
GTF3C4Q9UKN8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GTF3C4Q9UKN8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GTF3C4Q9UKN8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
GTF3C4Q9UKN8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
GTF3C4Q9UKN8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GTF3C4Q9UKN8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
GTF3C4Q9UKN8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GTF3C4Q9UKN8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GTF3C4Q9UKN8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
GTF3C4Q9UKN8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GTF3C4Q9UKN8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
GTF3C4Q9UKN8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
GTF3C4Q9UKN8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GTF3C4Q9UKN8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.59■□□□□ 0.89
GTF3C4Q9UKN8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.59■□□□□ 0.89
GTF3C4Q9UKN8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GTF3C4Q9UKN8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GTF3C4Q9UKN8 MIR1238-201ENST00000408483 83 ntBASIC20.59■□□□□ 0.89
GTF3C4Q9UKN8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.59■□□□□ 0.89
GTF3C4Q9UKN8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GTF3C4Q9UKN8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
GTF3C4Q9UKN8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
GTF3C4Q9UKN8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.59■□□□□ 0.89
GTF3C4Q9UKN8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
GTF3C4Q9UKN8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.59■□□□□ 0.89
GTF3C4Q9UKN8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GTF3C4Q9UKN8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GTF3C4Q9UKN8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GTF3C4Q9UKN8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GTF3C4Q9UKN8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
GTF3C4Q9UKN8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GTF3C4Q9UKN8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
GTF3C4Q9UKN8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GTF3C4Q9UKN8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GTF3C4Q9UKN8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.58■□□□□ 0.89
GTF3C4Q9UKN8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GTF3C4Q9UKN8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
GTF3C4Q9UKN8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
GTF3C4Q9UKN8 AL390955.1-201ENST00000428694 934 ntBASIC20.58■□□□□ 0.89
GTF3C4Q9UKN8 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.58■□□□□ 0.89
GTF3C4Q9UKN8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.58■□□□□ 0.89
GTF3C4Q9UKN8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
GTF3C4Q9UKN8 KRT8P9-201ENST00000558927 1449 ntBASIC20.58■□□□□ 0.88
GTF3C4Q9UKN8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
GTF3C4Q9UKN8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
GTF3C4Q9UKN8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GTF3C4Q9UKN8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.88
GTF3C4Q9UKN8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
GTF3C4Q9UKN8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.58■□□□□ 0.88
GTF3C4Q9UKN8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.58■□□□□ 0.88
GTF3C4Q9UKN8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
GTF3C4Q9UKN8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GTF3C4Q9UKN8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GTF3C4Q9UKN8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GTF3C4Q9UKN8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms