Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RLIMQ9NVW2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RLIMQ9NVW2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RLIMQ9NVW2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.84■□□□□ 0.45
RLIMQ9NVW2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
RLIMQ9NVW2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.84■□□□□ 0.45
RLIMQ9NVW2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RLIMQ9NVW2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RLIMQ9NVW2 RNA5SP413-201ENST00000516373 109 ntBASIC17.84■□□□□ 0.45
RLIMQ9NVW2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.84■□□□□ 0.45
RLIMQ9NVW2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.84■□□□□ 0.45
RLIMQ9NVW2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RLIMQ9NVW2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.84■□□□□ 0.45
RLIMQ9NVW2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RLIMQ9NVW2 AC008403.3-201ENST00000598924 454 ntBASIC17.84■□□□□ 0.45
RLIMQ9NVW2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RLIMQ9NVW2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RLIMQ9NVW2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RLIMQ9NVW2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RLIMQ9NVW2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RLIMQ9NVW2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RLIMQ9NVW2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RLIMQ9NVW2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RLIMQ9NVW2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RLIMQ9NVW2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RLIMQ9NVW2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RLIMQ9NVW2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.83■□□□□ 0.45
RLIMQ9NVW2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
RLIMQ9NVW2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
RLIMQ9NVW2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.83■□□□□ 0.45
RLIMQ9NVW2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.83■□□□□ 0.45
RLIMQ9NVW2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
RLIMQ9NVW2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.83■□□□□ 0.44
RLIMQ9NVW2 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.83■□□□□ 0.44
RLIMQ9NVW2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.83■□□□□ 0.44
RLIMQ9NVW2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RLIMQ9NVW2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RLIMQ9NVW2 POM121L13P-201ENST00000422362 380 ntBASIC17.83■□□□□ 0.44
RLIMQ9NVW2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.83■□□□□ 0.44
RLIMQ9NVW2 KRT18P16-201ENST00000510337 1294 ntBASIC17.83■□□□□ 0.44
RLIMQ9NVW2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.83■□□□□ 0.44
RLIMQ9NVW2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.83■□□□□ 0.44
RLIMQ9NVW2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.83■□□□□ 0.44
RLIMQ9NVW2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.83■□□□□ 0.44
RLIMQ9NVW2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RLIMQ9NVW2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RLIMQ9NVW2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RLIMQ9NVW2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RLIMQ9NVW2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
RLIMQ9NVW2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RLIMQ9NVW2 LETM1P2-201ENST00000597330 2178 ntBASIC17.81■□□□□ 0.44
RLIMQ9NVW2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RLIMQ9NVW2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.81■□□□□ 0.44
RLIMQ9NVW2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RLIMQ9NVW2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RLIMQ9NVW2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RLIMQ9NVW2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RLIMQ9NVW2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RLIMQ9NVW2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.81■□□□□ 0.44
RLIMQ9NVW2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RLIMQ9NVW2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
RLIMQ9NVW2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RLIMQ9NVW2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.81■□□□□ 0.44
RLIMQ9NVW2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.81■□□□□ 0.44
RLIMQ9NVW2 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.81■□□□□ 0.44
RLIMQ9NVW2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.81■□□□□ 0.44
RLIMQ9NVW2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.81■□□□□ 0.44
RLIMQ9NVW2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.81■□□□□ 0.44
RLIMQ9NVW2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.81■□□□□ 0.44
RLIMQ9NVW2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RLIMQ9NVW2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.81■□□□□ 0.44
RLIMQ9NVW2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.81■□□□□ 0.44
RLIMQ9NVW2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms