Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 TEX21P-204ENST00000641479 1693 ntBASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 CROCCP3-202ENST00000420820 1947 ntBASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LIN7CQ9NUP9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LIN7CQ9NUP9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC15.91■□□□□ 0.14
LIN7CQ9NUP9 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LIN7CQ9NUP9 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
LIN7CQ9NUP9 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LIN7CQ9NUP9 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LIN7CQ9NUP9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LIN7CQ9NUP9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LIN7CQ9NUP9 HTR7P1-202ENST00000624664 4411 ntBASIC15.91■□□□□ 0.14
LIN7CQ9NUP9 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LIN7CQ9NUP9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LIN7CQ9NUP9 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LIN7CQ9NUP9 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LIN7CQ9NUP9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LIN7CQ9NUP9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.91■□□□□ 0.14
LIN7CQ9NUP9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LIN7CQ9NUP9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LIN7CQ9NUP9 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LIN7CQ9NUP9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.91■□□□□ 0.14
LIN7CQ9NUP9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
LIN7CQ9NUP9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.91■□□□□ 0.14
LIN7CQ9NUP9 ZNF815P-204ENST00000434898 1737 ntBASIC15.91■□□□□ 0.14
LIN7CQ9NUP9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LIN7CQ9NUP9 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LIN7CQ9NUP9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.91■□□□□ 0.14
LIN7CQ9NUP9 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LIN7CQ9NUP9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
LIN7CQ9NUP9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 UNC93B4-201ENST00000505679 747 ntBASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 AP003097.1-201ENST00000530657 1135 ntBASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 SOX15-203ENST00000570788 1093 ntBASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms