Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS45Q9NRW7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VPS45Q9NRW7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.75■□□□□ 0.75
VPS45Q9NRW7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.75■□□□□ 0.75
VPS45Q9NRW7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.75■□□□□ 0.75
VPS45Q9NRW7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
VPS45Q9NRW7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
VPS45Q9NRW7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VPS45Q9NRW7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VPS45Q9NRW7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VPS45Q9NRW7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.75■□□□□ 0.75
VPS45Q9NRW7 UPK3BP1-201ENST00000428678 509 ntBASIC19.75■□□□□ 0.75
VPS45Q9NRW7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.75■□□□□ 0.75
VPS45Q9NRW7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VPS45Q9NRW7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.75■□□□□ 0.75
VPS45Q9NRW7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.75■□□□□ 0.75
VPS45Q9NRW7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.75■□□□□ 0.75
VPS45Q9NRW7 AC006011.2-201ENST00000621313 1158 ntBASIC19.75■□□□□ 0.75
VPS45Q9NRW7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VPS45Q9NRW7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VPS45Q9NRW7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VPS45Q9NRW7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
VPS45Q9NRW7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
VPS45Q9NRW7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
VPS45Q9NRW7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
VPS45Q9NRW7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
VPS45Q9NRW7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.75■□□□□ 0.75
VPS45Q9NRW7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VPS45Q9NRW7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 AC093484.2-201ENST00000580996 2166 ntBASIC19.74■□□□□ 0.75
VPS45Q9NRW7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 AL020996.1-203ENST00000536896 2307 ntBASIC19.74■□□□□ 0.75
VPS45Q9NRW7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.74■□□□□ 0.75
VPS45Q9NRW7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.73■□□□□ 0.75
VPS45Q9NRW7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.73■□□□□ 0.75
VPS45Q9NRW7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.73■□□□□ 0.75
VPS45Q9NRW7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS45Q9NRW7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS45Q9NRW7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS45Q9NRW7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
VPS45Q9NRW7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS45Q9NRW7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.73■□□□□ 0.75
VPS45Q9NRW7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.73■□□□□ 0.75
VPS45Q9NRW7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.73■□□□□ 0.75
VPS45Q9NRW7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
VPS45Q9NRW7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.73■□□□□ 0.75
VPS45Q9NRW7 AL031985.4-201ENST00000642138 673 ntBASIC19.73■□□□□ 0.75
VPS45Q9NRW7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS45Q9NRW7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS45Q9NRW7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VPS45Q9NRW7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS45Q9NRW7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VPS45Q9NRW7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.73■□□□□ 0.75
VPS45Q9NRW7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS45Q9NRW7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
VPS45Q9NRW7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS45Q9NRW7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VPS45Q9NRW7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS45Q9NRW7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS45Q9NRW7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS45Q9NRW7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
VPS45Q9NRW7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
VPS45Q9NRW7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VPS45Q9NRW7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
VPS45Q9NRW7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.72■□□□□ 0.75
VPS45Q9NRW7 EGLN1P1-201ENST00000531623 762 ntBASIC19.72■□□□□ 0.75
VPS45Q9NRW7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
VPS45Q9NRW7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS45Q9NRW7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VPS45Q9NRW7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.72■□□□□ 0.75
VPS45Q9NRW7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS45Q9NRW7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.72■□□□□ 0.75
VPS45Q9NRW7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS45Q9NRW7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms