Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR1BQ9H9Y6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR1BQ9H9Y6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
POLR1BQ9H9Y6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR1BQ9H9Y6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
POLR1BQ9H9Y6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
POLR1BQ9H9Y6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR1BQ9H9Y6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR1BQ9H9Y6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.92■□□□□ 0.62
POLR1BQ9H9Y6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.92■□□□□ 0.62
POLR1BQ9H9Y6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.92■□□□□ 0.62
POLR1BQ9H9Y6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.92■□□□□ 0.62
POLR1BQ9H9Y6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
POLR1BQ9H9Y6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.92■□□□□ 0.62
POLR1BQ9H9Y6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.92■□□□□ 0.62
POLR1BQ9H9Y6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.92■□□□□ 0.62
POLR1BQ9H9Y6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR1BQ9H9Y6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
POLR1BQ9H9Y6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR1BQ9H9Y6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR1BQ9H9Y6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR1BQ9H9Y6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR1BQ9H9Y6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR1BQ9H9Y6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
POLR1BQ9H9Y6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
POLR1BQ9H9Y6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR1BQ9H9Y6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR1BQ9H9Y6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.91■□□□□ 0.62
POLR1BQ9H9Y6 FSCN1P1-201ENST00000568912 1481 ntBASIC18.91■□□□□ 0.62
POLR1BQ9H9Y6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
POLR1BQ9H9Y6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.91■□□□□ 0.62
POLR1BQ9H9Y6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
POLR1BQ9H9Y6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
POLR1BQ9H9Y6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
POLR1BQ9H9Y6 ATP5G1P1-201ENST00000448724 379 ntBASIC18.91■□□□□ 0.62
POLR1BQ9H9Y6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
POLR1BQ9H9Y6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR1BQ9H9Y6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.91■□□□□ 0.62
POLR1BQ9H9Y6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
POLR1BQ9H9Y6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.91■□□□□ 0.62
POLR1BQ9H9Y6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
POLR1BQ9H9Y6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR1BQ9H9Y6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR1BQ9H9Y6 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR1BQ9H9Y6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR1BQ9H9Y6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
POLR1BQ9H9Y6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 AC010203.1-204ENST00000548782 407 ntBASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 KRT8P20-201ENST00000423953 1409 ntBASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
POLR1BQ9H9Y6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
POLR1BQ9H9Y6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
POLR1BQ9H9Y6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR1BQ9H9Y6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
POLR1BQ9H9Y6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR1BQ9H9Y6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR1BQ9H9Y6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
POLR1BQ9H9Y6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR1BQ9H9Y6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
POLR1BQ9H9Y6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
POLR1BQ9H9Y6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.89■□□□□ 0.61
POLR1BQ9H9Y6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.89■□□□□ 0.61
POLR1BQ9H9Y6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.89■□□□□ 0.61
POLR1BQ9H9Y6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms