Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ATXN3LQ9H3M9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
ATXN3LQ9H3M9 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.11■□□□□ 0.81
ATXN3LQ9H3M9 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.11■□□□□ 0.81
ATXN3LQ9H3M9 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ATXN3LQ9H3M9 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.11■□□□□ 0.81
ATXN3LQ9H3M9 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.11■□□□□ 0.81
ATXN3LQ9H3M9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.11■□□□□ 0.81
ATXN3LQ9H3M9 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.11■□□□□ 0.81
ATXN3LQ9H3M9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ATXN3LQ9H3M9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.11■□□□□ 0.81
ATXN3LQ9H3M9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.11■□□□□ 0.81
ATXN3LQ9H3M9 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.11■□□□□ 0.81
ATXN3LQ9H3M9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ATXN3LQ9H3M9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.11■□□□□ 0.81
ATXN3LQ9H3M9 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.11■□□□□ 0.81
ATXN3LQ9H3M9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.11■□□□□ 0.81
ATXN3LQ9H3M9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.11■□□□□ 0.81
ATXN3LQ9H3M9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ATXN3LQ9H3M9 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.11■□□□□ 0.81
ATXN3LQ9H3M9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ATXN3LQ9H3M9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ATXN3LQ9H3M9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 CA15P1-201ENST00000481698 905 ntBASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 AC022616.7-201ENST00000525383 220 ntBASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 AC125437.2-201ENST00000625180 2167 ntBASIC20.1■□□□□ 0.81
ATXN3LQ9H3M9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATXN3LQ9H3M9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.09■□□□□ 0.81
ATXN3LQ9H3M9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATXN3LQ9H3M9 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATXN3LQ9H3M9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATXN3LQ9H3M9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATXN3LQ9H3M9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATXN3LQ9H3M9 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATXN3LQ9H3M9 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATXN3LQ9H3M9 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATXN3LQ9H3M9 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATXN3LQ9H3M9 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATXN3LQ9H3M9 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.09■□□□□ 0.81
ATXN3LQ9H3M9 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATXN3LQ9H3M9 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATXN3LQ9H3M9 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.09■□□□□ 0.81
ATXN3LQ9H3M9 AC063952.2-201ENST00000498792 1227 ntBASIC20.09■□□□□ 0.81
ATXN3LQ9H3M9 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
ATXN3LQ9H3M9 LINC01238-205ENST00000567549 1107 ntBASIC20.09■□□□□ 0.81
ATXN3LQ9H3M9 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.09■□□□□ 0.81
ATXN3LQ9H3M9 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
ATXN3LQ9H3M9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
ATXN3LQ9H3M9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATXN3LQ9H3M9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
ATXN3LQ9H3M9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
ATXN3LQ9H3M9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
ATXN3LQ9H3M9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.08■□□□□ 0.81
ATXN3LQ9H3M9 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
ATXN3LQ9H3M9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ATXN3LQ9H3M9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
ATXN3LQ9H3M9 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.08■□□□□ 0.81
ATXN3LQ9H3M9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ATXN3LQ9H3M9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
ATXN3LQ9H3M9 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
ATXN3LQ9H3M9 COX11P1-201ENST00000489116 835 ntBASIC20.08■□□□□ 0.81
ATXN3LQ9H3M9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.08■□□□□ 0.81
ATXN3LQ9H3M9 AC141257.4-201ENST00000634557 245 ntBASIC20.08■□□□□ 0.81
ATXN3LQ9H3M9 AC136944.6-201ENST00000634818 245 ntBASIC20.08■□□□□ 0.81
ATXN3LQ9H3M9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
ATXN3LQ9H3M9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.08■□□□□ 0.8
ATXN3LQ9H3M9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ATXN3LQ9H3M9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ATXN3LQ9H3M9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ATXN3LQ9H3M9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.08■□□□□ 0.8
ATXN3LQ9H3M9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ATXN3LQ9H3M9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ATXN3LQ9H3M9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ATXN3LQ9H3M9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN3LQ9H3M9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN3LQ9H3M9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms