Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.17■□□□□ 0.98
RNF39Q9H2S5 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
RNF39Q9H2S5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF39Q9H2S5 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF39Q9H2S5 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF39Q9H2S5 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF39Q9H2S5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF39Q9H2S5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.16■□□□□ 0.98
RNF39Q9H2S5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF39Q9H2S5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF39Q9H2S5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF39Q9H2S5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RNF39Q9H2S5 LIPK-201ENST00000404190 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF39Q9H2S5 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF39Q9H2S5 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF39Q9H2S5 WT1-AS-206ENST00000525436 1254 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF39Q9H2S5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.16■□□□□ 0.98
RNF39Q9H2S5 ZNF506-204ENST00000545006 1007 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF39Q9H2S5 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC21.16■□□□□ 0.98
RNF39Q9H2S5 AC026271.3-201ENST00000571884 352 ntBASIC21.16■□□□□ 0.98
RNF39Q9H2S5 AC130371.2-201ENST00000619443 611 ntBASIC21.16■□□□□ 0.98
RNF39Q9H2S5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
RNF39Q9H2S5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
RNF39Q9H2S5 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF39Q9H2S5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF39Q9H2S5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF39Q9H2S5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF39Q9H2S5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RNF39Q9H2S5 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
RNF39Q9H2S5 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF39Q9H2S5 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF39Q9H2S5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF39Q9H2S5 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF39Q9H2S5 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF39Q9H2S5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.15■□□□□ 0.98
RNF39Q9H2S5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF39Q9H2S5 KRT8P8-201ENST00000434750 1448 ntBASIC21.15■□□□□ 0.98
RNF39Q9H2S5 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RNF39Q9H2S5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF39Q9H2S5 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.15■□□□□ 0.98
RNF39Q9H2S5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
RNF39Q9H2S5 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF39Q9H2S5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF39Q9H2S5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF39Q9H2S5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF39Q9H2S5 TYW3-205ENST00000479111 1130 ntTSL 3 BASIC21.15■□□□□ 0.98
RNF39Q9H2S5 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.15■□□□□ 0.98
RNF39Q9H2S5 AC096759.2-202ENST00000515230 777 ntTSL 3 BASIC21.15■□□□□ 0.98
RNF39Q9H2S5 RSF1-IT1-201ENST00000528233 632 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF39Q9H2S5 AC145285.6-201ENST00000604632 637 ntBASIC21.15■□□□□ 0.98
RNF39Q9H2S5 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RNF39Q9H2S5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
RNF39Q9H2S5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF39Q9H2S5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF39Q9H2S5 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF39Q9H2S5 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
RNF39Q9H2S5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF39Q9H2S5 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF39Q9H2S5 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF39Q9H2S5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.14■□□□□ 0.98
RNF39Q9H2S5 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
RNF39Q9H2S5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
RNF39Q9H2S5 LINC01465-201ENST00000408887 1940 ntBASIC21.14■□□□□ 0.98
RNF39Q9H2S5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 AL359918.2-201ENST00000412311 497 ntTSL 3 BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 VN1R87P-201ENST00000596706 487 ntBASIC21.14■□□□□ 0.97
RNF39Q9H2S5 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF39Q9H2S5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF39Q9H2S5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
RNF39Q9H2S5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF39Q9H2S5 AC112907.3-201ENST00000577781 2400 ntBASIC21.13■□□□□ 0.97
RNF39Q9H2S5 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF39Q9H2S5 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms