Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 TERF1P1-201ENST00000311003 1181 ntBASIC20.76■□□□□ 0.91
CDT1Q9H211 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.76■□□□□ 0.91
CDT1Q9H211 AC010203.1-204ENST00000548782 407 ntBASIC20.76■□□□□ 0.91
CDT1Q9H211 AL353719.1-201ENST00000566847 864 ntBASIC20.76■□□□□ 0.91
CDT1Q9H211 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDT1Q9H211 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDT1Q9H211 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.76■□□□□ 0.91
CDT1Q9H211 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.76■□□□□ 0.91
CDT1Q9H211 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDT1Q9H211 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.75■□□□□ 0.91
CDT1Q9H211 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDT1Q9H211 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CDT1Q9H211 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CDT1Q9H211 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDT1Q9H211 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDT1Q9H211 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.75■□□□□ 0.91
CDT1Q9H211 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CDT1Q9H211 TSPY17P-201ENST00000450329 467 ntBASIC20.75■□□□□ 0.91
CDT1Q9H211 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
CDT1Q9H211 RN7SL850P-201ENST00000579959 291 ntBASIC20.75■□□□□ 0.91
CDT1Q9H211 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.75■□□□□ 0.91
CDT1Q9H211 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CDT1Q9H211 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.75■□□□□ 0.91
CDT1Q9H211 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CDT1Q9H211 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
CDT1Q9H211 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDT1Q9H211 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDT1Q9H211 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDT1Q9H211 AC007952.6-201ENST00000573168 2673 ntBASIC20.74■□□□□ 0.91
CDT1Q9H211 AC003957.1-201ENST00000625108 2673 ntBASIC20.74■□□□□ 0.91
CDT1Q9H211 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
CDT1Q9H211 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDT1Q9H211 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDT1Q9H211 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDT1Q9H211 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDT1Q9H211 KRT18P57-201ENST00000443599 1254 ntBASIC20.74■□□□□ 0.91
CDT1Q9H211 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.74■□□□□ 0.91
CDT1Q9H211 AC073508.3-201ENST00000619697 1419 ntBASIC20.74■□□□□ 0.91
CDT1Q9H211 AC010653.2-201ENST00000623505 997 ntBASIC20.74■□□□□ 0.91
CDT1Q9H211 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDT1Q9H211 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDT1Q9H211 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.74■□□□□ 0.91
CDT1Q9H211 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CDT1Q9H211 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDT1Q9H211 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.74■□□□□ 0.91
CDT1Q9H211 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDT1Q9H211 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDT1Q9H211 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDT1Q9H211 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDT1Q9H211 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDT1Q9H211 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDT1Q9H211 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDT1Q9H211 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
CDT1Q9H211 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CDT1Q9H211 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.73■□□□□ 0.91
CDT1Q9H211 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.73■□□□□ 0.91
CDT1Q9H211 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.73■□□□□ 0.91
CDT1Q9H211 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDT1Q9H211 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDT1Q9H211 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
CDT1Q9H211 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDT1Q9H211 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDT1Q9H211 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CDT1Q9H211 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.73■□□□□ 0.91
CDT1Q9H211 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDT1Q9H211 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDT1Q9H211 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDT1Q9H211 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDT1Q9H211 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CDT1Q9H211 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDT1Q9H211 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDT1Q9H211 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CDT1Q9H211 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.72■□□□□ 0.91
CDT1Q9H211 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.72■□□□□ 0.91
CDT1Q9H211 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.72■□□□□ 0.91
CDT1Q9H211 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDT1Q9H211 HMGA1P5-201ENST00000412453 271 ntBASIC20.72■□□□□ 0.91
CDT1Q9H211 AL137013.1-201ENST00000432946 1228 ntBASIC20.72■□□□□ 0.91
CDT1Q9H211 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.72■□□□□ 0.91
CDT1Q9H211 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.72■□□□□ 0.91
CDT1Q9H211 AP003041.3-201ENST00000527151 707 ntBASIC20.72■□□□□ 0.91
CDT1Q9H211 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.72■□□□□ 0.91
CDT1Q9H211 AC092865.7-201ENST00000641832 219 ntBASIC20.72■□□□□ 0.91
CDT1Q9H211 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDT1Q9H211 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDT1Q9H211 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDT1Q9H211 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDT1Q9H211 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CDT1Q9H211 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDT1Q9H211 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.71■□□□□ 0.91
CDT1Q9H211 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.71■□□□□ 0.91
CDT1Q9H211 AL032819.2-201ENST00000624543 2162 ntBASIC20.71■□□□□ 0.91
CDT1Q9H211 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDT1Q9H211 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.71■□□□□ 0.91
CDT1Q9H211 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CDT1Q9H211 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDT1Q9H211 TMPOP1-202ENST00000424642 1267 ntBASIC20.71■□□□□ 0.91
CDT1Q9H211 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CDT1Q9H211 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDT1Q9H211 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms