Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
CCDC113Q9H0I3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CCDC113Q9H0I3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CCDC113Q9H0I3 AC004951.3-201ENST00000418645 1148 ntBASIC21.2■□□□□ 0.98
CCDC113Q9H0I3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC113Q9H0I3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.2■□□□□ 0.98
CCDC113Q9H0I3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC113Q9H0I3 AC091390.4-202ENST00000476426 537 ntBASIC21.2■□□□□ 0.98
CCDC113Q9H0I3 FITM1-202ENST00000559294 800 ntBASIC21.2■□□□□ 0.98
CCDC113Q9H0I3 AC011298.2-201ENST00000617989 482 ntBASIC21.2■□□□□ 0.98
CCDC113Q9H0I3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CCDC113Q9H0I3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC113Q9H0I3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC113Q9H0I3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC113Q9H0I3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC113Q9H0I3 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.2■□□□□ 0.98
CCDC113Q9H0I3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CCDC113Q9H0I3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC113Q9H0I3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC113Q9H0I3 ZNF815P-204ENST00000434898 1737 ntBASIC21.19■□□□□ 0.98
CCDC113Q9H0I3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC113Q9H0I3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC113Q9H0I3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC113Q9H0I3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCDC113Q9H0I3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC113Q9H0I3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CCDC113Q9H0I3 AL390955.1-201ENST00000428694 934 ntBASIC21.19■□□□□ 0.98
CCDC113Q9H0I3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.19■□□□□ 0.98
CCDC113Q9H0I3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC113Q9H0I3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC113Q9H0I3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC113Q9H0I3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCDC113Q9H0I3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC113Q9H0I3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC113Q9H0I3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC113Q9H0I3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCDC113Q9H0I3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CCDC113Q9H0I3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC113Q9H0I3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.18■□□□□ 0.98
CCDC113Q9H0I3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC113Q9H0I3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCDC113Q9H0I3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC113Q9H0I3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC113Q9H0I3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.18■□□□□ 0.98
CCDC113Q9H0I3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC113Q9H0I3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCDC113Q9H0I3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC113Q9H0I3 MIR1238-201ENST00000408483 83 ntBASIC21.18■□□□□ 0.98
CCDC113Q9H0I3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC113Q9H0I3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC113Q9H0I3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.18■□□□□ 0.98
CCDC113Q9H0I3 AP000692.2-201ENST00000608391 879 ntBASIC21.18■□□□□ 0.98
CCDC113Q9H0I3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
CCDC113Q9H0I3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CCDC113Q9H0I3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCDC113Q9H0I3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC113Q9H0I3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC113Q9H0I3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC113Q9H0I3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC113Q9H0I3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC113Q9H0I3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC113Q9H0I3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC113Q9H0I3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC113Q9H0I3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.18■□□□□ 0.98
CCDC113Q9H0I3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 MMP23A-201ENST00000234610 1017 ntBASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 AC211429.1-201ENST00000415277 523 ntBASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 AC012306.2-201ENST00000609350 630 ntBASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC113Q9H0I3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC113Q9H0I3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCDC113Q9H0I3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC113Q9H0I3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms