Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF38Q9H0F5 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
RNF38Q9H0F5 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF38Q9H0F5 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.86■□□□□ 0.77
RNF38Q9H0F5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF38Q9H0F5 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
RNF38Q9H0F5 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF38Q9H0F5 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF38Q9H0F5 AC141257.4-201ENST00000634557 245 ntBASIC19.86■□□□□ 0.77
RNF38Q9H0F5 AC136944.6-201ENST00000634818 245 ntBASIC19.86■□□□□ 0.77
RNF38Q9H0F5 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.86■□□□□ 0.77
RNF38Q9H0F5 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF38Q9H0F5 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
RNF38Q9H0F5 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF38Q9H0F5 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF38Q9H0F5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF38Q9H0F5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.86■□□□□ 0.77
RNF38Q9H0F5 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF38Q9H0F5 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF38Q9H0F5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF38Q9H0F5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF38Q9H0F5 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.85■□□□□ 0.77
RNF38Q9H0F5 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RNF38Q9H0F5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF38Q9H0F5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF38Q9H0F5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF38Q9H0F5 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.84■□□□□ 0.77
RNF38Q9H0F5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF38Q9H0F5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RNF38Q9H0F5 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF38Q9H0F5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.84■□□□□ 0.77
RNF38Q9H0F5 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF38Q9H0F5 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.84■□□□□ 0.77
RNF38Q9H0F5 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RNF38Q9H0F5 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.84■□□□□ 0.77
RNF38Q9H0F5 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.84■□□□□ 0.77
RNF38Q9H0F5 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RNF38Q9H0F5 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RNF38Q9H0F5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF38Q9H0F5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.84■□□□□ 0.77
RNF38Q9H0F5 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF38Q9H0F5 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF38Q9H0F5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF38Q9H0F5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF38Q9H0F5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF38Q9H0F5 KRT8P45-201ENST00000414328 1447 ntBASIC19.84■□□□□ 0.77
RNF38Q9H0F5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.84■□□□□ 0.77
RNF38Q9H0F5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF38Q9H0F5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF38Q9H0F5 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF38Q9H0F5 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF38Q9H0F5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.83■□□□□ 0.77
RNF38Q9H0F5 AC073130.3-201ENST00000624389 2278 ntBASIC19.83■□□□□ 0.77
RNF38Q9H0F5 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF38Q9H0F5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF38Q9H0F5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF38Q9H0F5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF38Q9H0F5 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF38Q9H0F5 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF38Q9H0F5 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF38Q9H0F5 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF38Q9H0F5 YBX1P2-201ENST00000489612 999 ntBASIC19.83■□□□□ 0.77
RNF38Q9H0F5 AC063952.2-201ENST00000498792 1227 ntBASIC19.83■□□□□ 0.77
RNF38Q9H0F5 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF38Q9H0F5 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.83■□□□□ 0.77
RNF38Q9H0F5 AC011558.1-201ENST00000623459 338 ntBASIC19.83■□□□□ 0.77
RNF38Q9H0F5 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF38Q9H0F5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.83■□□□□ 0.76
RNF38Q9H0F5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.83■□□□□ 0.76
RNF38Q9H0F5 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RNF38Q9H0F5 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RNF38Q9H0F5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF38Q9H0F5 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF38Q9H0F5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms