Protein–RNA interactions for Protein: Q9C0K7

STRADB, STE20-related kinase adapter protein beta, humanhuman

Predictions only

Length 418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBQ9C0K7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
STRADBQ9C0K7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
STRADBQ9C0K7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
STRADBQ9C0K7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
STRADBQ9C0K7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.19■□□□□ 0.5
STRADBQ9C0K7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.19■□□□□ 0.5
STRADBQ9C0K7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
STRADBQ9C0K7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.19■□□□□ 0.5
STRADBQ9C0K7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
STRADBQ9C0K7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
STRADBQ9C0K7 AL691432.3-201ENST00000621860 400 ntBASIC18.19■□□□□ 0.5
STRADBQ9C0K7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.19■□□□□ 0.5
STRADBQ9C0K7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
STRADBQ9C0K7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
STRADBQ9C0K7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
STRADBQ9C0K7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
STRADBQ9C0K7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
STRADBQ9C0K7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
STRADBQ9C0K7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 AC073314.1-201ENST00000568729 2216 ntBASIC18.18■□□□□ 0.5
STRADBQ9C0K7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 TSPY21P-201ENST00000433481 731 ntBASIC18.18■□□□□ 0.5
STRADBQ9C0K7 TPM4P1-201ENST00000436100 807 ntBASIC18.18■□□□□ 0.5
STRADBQ9C0K7 DUSP5P1-201ENST00000441325 1139 ntBASIC18.18■□□□□ 0.5
STRADBQ9C0K7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 AL121894.2-201ENST00000602977 491 ntBASIC18.18■□□□□ 0.5
STRADBQ9C0K7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 AL512408.1-201ENST00000569378 2000 ntBASIC18.18■□□□□ 0.5
STRADBQ9C0K7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
STRADBQ9C0K7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
STRADBQ9C0K7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
STRADBQ9C0K7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
STRADBQ9C0K7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.17■□□□□ 0.5
STRADBQ9C0K7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.17■□□□□ 0.5
STRADBQ9C0K7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
STRADBQ9C0K7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
STRADBQ9C0K7 AP005212.1-201ENST00000581547 1997 ntBASIC18.17■□□□□ 0.5
STRADBQ9C0K7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
STRADBQ9C0K7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
STRADBQ9C0K7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.17■□□□□ 0.5
STRADBQ9C0K7 CLEC4GP1-201ENST00000596555 870 ntBASIC18.17■□□□□ 0.5
STRADBQ9C0K7 CR769767.2-201ENST00000622735 460 ntBASIC18.17■□□□□ 0.5
STRADBQ9C0K7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
STRADBQ9C0K7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.17■□□□□ 0.5
STRADBQ9C0K7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
STRADBQ9C0K7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
STRADBQ9C0K7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
STRADBQ9C0K7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
STRADBQ9C0K7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
STRADBQ9C0K7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.17■□□□□ 0.5
STRADBQ9C0K7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
STRADBQ9C0K7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
STRADBQ9C0K7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.16■□□□□ 0.5
STRADBQ9C0K7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.16■□□□□ 0.5
STRADBQ9C0K7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
STRADBQ9C0K7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
STRADBQ9C0K7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
STRADBQ9C0K7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.16■□□□□ 0.5
STRADBQ9C0K7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.16■□□□□ 0.5
STRADBQ9C0K7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.16■□□□□ 0.5
STRADBQ9C0K7 HYMAI.1-201ENST00000620949 238 ntBASIC18.16■□□□□ 0.5
STRADBQ9C0K7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.16■□□□□ 0.5
STRADBQ9C0K7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
STRADBQ9C0K7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
STRADBQ9C0K7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.16■□□□□ 0.5
STRADBQ9C0K7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
STRADBQ9C0K7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
STRADBQ9C0K7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
STRADBQ9C0K7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
STRADBQ9C0K7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
STRADBQ9C0K7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
STRADBQ9C0K7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
STRADBQ9C0K7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
STRADBQ9C0K7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.15■□□□□ 0.5
STRADBQ9C0K7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
STRADBQ9C0K7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
STRADBQ9C0K7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms