Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
UBE2OQ9C0C9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UBE2OQ9C0C9 KRT16P6-202ENST00000425692 1426 ntBASIC21.09■□□□□ 0.97
UBE2OQ9C0C9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
UBE2OQ9C0C9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.09■□□□□ 0.97
UBE2OQ9C0C9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.09■□□□□ 0.97
UBE2OQ9C0C9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.09■□□□□ 0.97
UBE2OQ9C0C9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UBE2OQ9C0C9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBE2OQ9C0C9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
UBE2OQ9C0C9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.09■□□□□ 0.97
UBE2OQ9C0C9 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBE2OQ9C0C9 KRT18P1-202ENST00000452408 1331 ntBASIC21.08■□□□□ 0.97
UBE2OQ9C0C9 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBE2OQ9C0C9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
UBE2OQ9C0C9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
UBE2OQ9C0C9 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
UBE2OQ9C0C9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
UBE2OQ9C0C9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
UBE2OQ9C0C9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBE2OQ9C0C9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBE2OQ9C0C9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBE2OQ9C0C9 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
UBE2OQ9C0C9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
UBE2OQ9C0C9 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.08■□□□□ 0.97
UBE2OQ9C0C9 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
UBE2OQ9C0C9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
UBE2OQ9C0C9 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
UBE2OQ9C0C9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBE2OQ9C0C9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
UBE2OQ9C0C9 FP700111.2-201ENST00000619190 1892 ntBASIC21.08■□□□□ 0.97
UBE2OQ9C0C9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBE2OQ9C0C9 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.08■□□□□ 0.97
UBE2OQ9C0C9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.08■□□□□ 0.96
UBE2OQ9C0C9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.96
UBE2OQ9C0C9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBE2OQ9C0C9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBE2OQ9C0C9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.07■□□□□ 0.96
UBE2OQ9C0C9 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.07■□□□□ 0.96
UBE2OQ9C0C9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
UBE2OQ9C0C9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
UBE2OQ9C0C9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.07■□□□□ 0.96
UBE2OQ9C0C9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
UBE2OQ9C0C9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBE2OQ9C0C9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
UBE2OQ9C0C9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
UBE2OQ9C0C9 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.07■□□□□ 0.96
UBE2OQ9C0C9 AC092597.1-201ENST00000487352 616 ntBASIC21.07■□□□□ 0.96
UBE2OQ9C0C9 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.07■□□□□ 0.96
UBE2OQ9C0C9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.07■□□□□ 0.96
UBE2OQ9C0C9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.07■□□□□ 0.96
UBE2OQ9C0C9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.07■□□□□ 0.96
UBE2OQ9C0C9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBE2OQ9C0C9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBE2OQ9C0C9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBE2OQ9C0C9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBE2OQ9C0C9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBE2OQ9C0C9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBE2OQ9C0C9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.06■□□□□ 0.96
UBE2OQ9C0C9 AC007225.1-201ENST00000566331 1836 ntBASIC21.06■□□□□ 0.96
UBE2OQ9C0C9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBE2OQ9C0C9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UBE2OQ9C0C9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.06■□□□□ 0.96
UBE2OQ9C0C9 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBE2OQ9C0C9 TEX30-205ENST00000376029 959 ntTSL 2 BASIC21.06■□□□□ 0.96
UBE2OQ9C0C9 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.06■□□□□ 0.96
UBE2OQ9C0C9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.06■□□□□ 0.96
UBE2OQ9C0C9 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.06■□□□□ 0.96
UBE2OQ9C0C9 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBE2OQ9C0C9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.06■□□□□ 0.96
UBE2OQ9C0C9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.06■□□□□ 0.96
UBE2OQ9C0C9 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UBE2OQ9C0C9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UBE2OQ9C0C9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBE2OQ9C0C9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UBE2OQ9C0C9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
UBE2OQ9C0C9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.05■□□□□ 0.96
UBE2OQ9C0C9 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBE2OQ9C0C9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.05■□□□□ 0.96
UBE2OQ9C0C9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
UBE2OQ9C0C9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBE2OQ9C0C9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
UBE2OQ9C0C9 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBE2OQ9C0C9 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBE2OQ9C0C9 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBE2OQ9C0C9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBE2OQ9C0C9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBE2OQ9C0C9 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBE2OQ9C0C9 RASA4DP-201ENST00000460726 1199 ntBASIC21.05■□□□□ 0.96
UBE2OQ9C0C9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.05■□□□□ 0.96
UBE2OQ9C0C9 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.05■□□□□ 0.96
UBE2OQ9C0C9 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.05■□□□□ 0.96
UBE2OQ9C0C9 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.05■□□□□ 0.96
UBE2OQ9C0C9 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC21.05■□□□□ 0.96
UBE2OQ9C0C9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBE2OQ9C0C9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
UBE2OQ9C0C9 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBE2OQ9C0C9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBE2OQ9C0C9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBE2OQ9C0C9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms