Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HERPUD2Q9BSE4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.86■□□□□ 0.77
HERPUD2Q9BSE4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.86■□□□□ 0.77
HERPUD2Q9BSE4 MTDHP1-201ENST00000605323 784 ntBASIC19.86■□□□□ 0.77
HERPUD2Q9BSE4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HERPUD2Q9BSE4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HERPUD2Q9BSE4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
HERPUD2Q9BSE4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HERPUD2Q9BSE4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HERPUD2Q9BSE4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HERPUD2Q9BSE4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.86■□□□□ 0.77
HERPUD2Q9BSE4 NBPF21P-201ENST00000425093 1451 ntBASIC19.86■□□□□ 0.77
HERPUD2Q9BSE4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HERPUD2Q9BSE4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HERPUD2Q9BSE4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
HERPUD2Q9BSE4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HERPUD2Q9BSE4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HERPUD2Q9BSE4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HERPUD2Q9BSE4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.85■□□□□ 0.77
HERPUD2Q9BSE4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HERPUD2Q9BSE4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HERPUD2Q9BSE4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
HERPUD2Q9BSE4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HERPUD2Q9BSE4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
HERPUD2Q9BSE4 AC120498.9-201ENST00000339021 3867 ntBASIC19.85■□□□□ 0.77
HERPUD2Q9BSE4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
HERPUD2Q9BSE4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HERPUD2Q9BSE4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HERPUD2Q9BSE4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HERPUD2Q9BSE4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
HERPUD2Q9BSE4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
HERPUD2Q9BSE4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HERPUD2Q9BSE4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.85■□□□□ 0.77
HERPUD2Q9BSE4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HERPUD2Q9BSE4 C1QL1P1-201ENST00000568105 661 ntBASIC19.85■□□□□ 0.77
HERPUD2Q9BSE4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.85■□□□□ 0.77
HERPUD2Q9BSE4 AC069544.1-201ENST00000609399 999 ntBASIC19.85■□□□□ 0.77
HERPUD2Q9BSE4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.85■□□□□ 0.77
HERPUD2Q9BSE4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.85■□□□□ 0.77
HERPUD2Q9BSE4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HERPUD2Q9BSE4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.84■□□□□ 0.77
HERPUD2Q9BSE4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HERPUD2Q9BSE4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HERPUD2Q9BSE4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
HERPUD2Q9BSE4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HERPUD2Q9BSE4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HERPUD2Q9BSE4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.84■□□□□ 0.77
HERPUD2Q9BSE4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HERPUD2Q9BSE4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.84■□□□□ 0.77
HERPUD2Q9BSE4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HERPUD2Q9BSE4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.84■□□□□ 0.77
HERPUD2Q9BSE4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.84■□□□□ 0.77
HERPUD2Q9BSE4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.84■□□□□ 0.77
HERPUD2Q9BSE4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.84■□□□□ 0.77
HERPUD2Q9BSE4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.84■□□□□ 0.77
HERPUD2Q9BSE4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HERPUD2Q9BSE4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HERPUD2Q9BSE4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HERPUD2Q9BSE4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HERPUD2Q9BSE4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HERPUD2Q9BSE4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
HERPUD2Q9BSE4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HERPUD2Q9BSE4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.84■□□□□ 0.77
HERPUD2Q9BSE4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HERPUD2Q9BSE4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.83■□□□□ 0.77
HERPUD2Q9BSE4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
HERPUD2Q9BSE4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
HERPUD2Q9BSE4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HERPUD2Q9BSE4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HERPUD2Q9BSE4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HERPUD2Q9BSE4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HERPUD2Q9BSE4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
HERPUD2Q9BSE4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HERPUD2Q9BSE4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.83■□□□□ 0.77
HERPUD2Q9BSE4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HERPUD2Q9BSE4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.83■□□□□ 0.77
HERPUD2Q9BSE4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HERPUD2Q9BSE4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HERPUD2Q9BSE4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.83■□□□□ 0.77
HERPUD2Q9BSE4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.83■□□□□ 0.77
HERPUD2Q9BSE4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.83■□□□□ 0.77
HERPUD2Q9BSE4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
HERPUD2Q9BSE4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HERPUD2Q9BSE4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HERPUD2Q9BSE4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HERPUD2Q9BSE4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.76
HERPUD2Q9BSE4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HERPUD2Q9BSE4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
HERPUD2Q9BSE4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HERPUD2Q9BSE4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.83■□□□□ 0.76
HERPUD2Q9BSE4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
HERPUD2Q9BSE4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
HERPUD2Q9BSE4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERPUD2Q9BSE4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERPUD2Q9BSE4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERPUD2Q9BSE4 AC005082.1-201ENST00000413042 2259 ntBASIC19.82■□□□□ 0.76
HERPUD2Q9BSE4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.82■□□□□ 0.76
HERPUD2Q9BSE4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HERPUD2Q9BSE4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERPUD2Q9BSE4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms