Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 AC034232.1-201ENST00000506026 1064 ntBASIC27.51■■■□□ 2
SCAF11Q99590 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC27.51■■■□□ 2
SCAF11Q99590 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC27.51■■□□□ 1.99
SCAF11Q99590 TCF3P1-201ENST00000423021 1937 ntBASIC27.51■■□□□ 1.99
SCAF11Q99590 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SCAF11Q99590 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SCAF11Q99590 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
SCAF11Q99590 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
SCAF11Q99590 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SCAF11Q99590 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC27.51■■□□□ 1.99
SCAF11Q99590 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC27.51■■□□□ 1.99
SCAF11Q99590 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SCAF11Q99590 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC27.5■■□□□ 1.99
SCAF11Q99590 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
SCAF11Q99590 TBC1D3P2-202ENST00000577902 1649 ntBASIC27.5■■□□□ 1.99
SCAF11Q99590 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SCAF11Q99590 AC093525.10-201ENST00000625130 1569 ntBASIC27.5■■□□□ 1.99
SCAF11Q99590 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SCAF11Q99590 AL391422.3-201ENST00000603791 2761 ntBASIC27.5■■□□□ 1.99
SCAF11Q99590 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SCAF11Q99590 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC27.5■■□□□ 1.99
SCAF11Q99590 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SCAF11Q99590 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC27.5■■□□□ 1.99
SCAF11Q99590 TSPY19P-201ENST00000418461 509 ntBASIC27.5■■□□□ 1.99
SCAF11Q99590 TSPY18P-201ENST00000441642 509 ntBASIC27.5■■□□□ 1.99
SCAF11Q99590 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC27.5■■□□□ 1.99
SCAF11Q99590 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SCAF11Q99590 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
SCAF11Q99590 SLC25A6P4-201ENST00000586535 553 ntBASIC27.5■■□□□ 1.99
SCAF11Q99590 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
SCAF11Q99590 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC27.49■■□□□ 1.99
SCAF11Q99590 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
SCAF11Q99590 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC27.49■■□□□ 1.99
SCAF11Q99590 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SCAF11Q99590 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SCAF11Q99590 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC27.49■■□□□ 1.99
SCAF11Q99590 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC27.49■■□□□ 1.99
SCAF11Q99590 AC106795.1-205ENST00000512851 1056 ntBASIC27.49■■□□□ 1.99
SCAF11Q99590 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SCAF11Q99590 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SCAF11Q99590 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC27.49■■□□□ 1.99
SCAF11Q99590 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
SCAF11Q99590 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
SCAF11Q99590 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SCAF11Q99590 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC27.48■■□□□ 1.99
SCAF11Q99590 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
SCAF11Q99590 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SCAF11Q99590 USP39-204ENST00000409766 2033 ntTSL 2 BASIC27.48■■□□□ 1.99
SCAF11Q99590 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC27.48■■□□□ 1.99
SCAF11Q99590 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC27.48■■□□□ 1.99
SCAF11Q99590 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC27.48■■□□□ 1.99
SCAF11Q99590 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
SCAF11Q99590 GXYLT1P4-201ENST00000613576 1192 ntBASIC27.48■■□□□ 1.99
SCAF11Q99590 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SCAF11Q99590 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
SCAF11Q99590 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC27.48■■□□□ 1.99
SCAF11Q99590 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC27.48■■□□□ 1.99
SCAF11Q99590 EFS-203ENST00000429593 2610 ntTSL 2 BASIC27.48■■□□□ 1.99
SCAF11Q99590 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC27.47■■□□□ 1.99
SCAF11Q99590 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC27.47■■□□□ 1.99
SCAF11Q99590 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SCAF11Q99590 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC27.47■■□□□ 1.99
SCAF11Q99590 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC27.47■■□□□ 1.99
SCAF11Q99590 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC27.47■■□□□ 1.99
SCAF11Q99590 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SCAF11Q99590 GAD2-202ENST00000376248 680 ntTSL 5 BASIC27.47■■□□□ 1.99
SCAF11Q99590 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC27.47■■□□□ 1.99
SCAF11Q99590 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC27.47■■□□□ 1.99
SCAF11Q99590 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC27.47■■□□□ 1.99
SCAF11Q99590 AL160237.2-201ENST00000556165 472 ntBASIC27.47■■□□□ 1.99
SCAF11Q99590 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SCAF11Q99590 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SCAF11Q99590 AL157384.1-201ENST00000445995 2473 ntBASIC27.47■■□□□ 1.99
SCAF11Q99590 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SCAF11Q99590 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC27.46■■□□□ 1.99
SCAF11Q99590 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
SCAF11Q99590 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC27.46■■□□□ 1.99
SCAF11Q99590 BUB3-202ENST00000368859 667 ntTSL 3 BASIC27.46■■□□□ 1.99
SCAF11Q99590 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SCAF11Q99590 CHCHD2P8-201ENST00000429873 447 ntBASIC27.46■■□□□ 1.99
SCAF11Q99590 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC27.46■■□□□ 1.99
SCAF11Q99590 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC27.46■■□□□ 1.99
SCAF11Q99590 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
SCAF11Q99590 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC27.46■■□□□ 1.99
SCAF11Q99590 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC27.46■■□□□ 1.99
SCAF11Q99590 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC27.46■■□□□ 1.99
SCAF11Q99590 AL671883.3-201ENST00000603274 991 ntBASIC27.46■■□□□ 1.99
SCAF11Q99590 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SCAF11Q99590 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SCAF11Q99590 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SCAF11Q99590 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC27.46■■□□□ 1.99
SCAF11Q99590 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SCAF11Q99590 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SCAF11Q99590 LINC01006-201ENST00000333319 2292 ntBASIC27.46■■□□□ 1.99
SCAF11Q99590 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC27.46■■□□□ 1.99
SCAF11Q99590 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC27.45■■□□□ 1.99
SCAF11Q99590 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC27.45■■□□□ 1.99
SCAF11Q99590 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
SCAF11Q99590 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.99
SCAF11Q99590 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms