Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PKP4Q99569 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.65■□□□□ 0.58
PKP4Q99569 AP001412.1-201ENST00000608405 714 ntBASIC18.65■□□□□ 0.58
PKP4Q99569 AP006294.2-201ENST00000641667 209 ntBASIC18.65■□□□□ 0.58
PKP4Q99569 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PKP4Q99569 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PKP4Q99569 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PKP4Q99569 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
PKP4Q99569 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
PKP4Q99569 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.65■□□□□ 0.58
PKP4Q99569 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
PKP4Q99569 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PKP4Q99569 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PKP4Q99569 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
PKP4Q99569 RCC2P6-201ENST00000526625 1557 ntBASIC18.64■□□□□ 0.58
PKP4Q99569 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PKP4Q99569 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.64■□□□□ 0.57
PKP4Q99569 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PKP4Q99569 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PKP4Q99569 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.64■□□□□ 0.57
PKP4Q99569 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PKP4Q99569 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.64■□□□□ 0.57
PKP4Q99569 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.64■□□□□ 0.57
PKP4Q99569 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.64■□□□□ 0.57
PKP4Q99569 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
PKP4Q99569 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PKP4Q99569 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
PKP4Q99569 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PKP4Q99569 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.64■□□□□ 0.57
PKP4Q99569 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PKP4Q99569 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PKP4Q99569 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PKP4Q99569 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PKP4Q99569 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PKP4Q99569 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PKP4Q99569 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PKP4Q99569 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PKP4Q99569 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.63■□□□□ 0.57
PKP4Q99569 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PKP4Q99569 MIR718-201ENST00000390190 70 ntBASIC18.63■□□□□ 0.57
PKP4Q99569 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PKP4Q99569 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.63■□□□□ 0.57
PKP4Q99569 AC008040.2-201ENST00000461049 708 ntBASIC18.63■□□□□ 0.57
PKP4Q99569 AC011506.1-201ENST00000474329 610 ntBASIC18.63■□□□□ 0.57
PKP4Q99569 AC091390.4-202ENST00000476426 537 ntBASIC18.63■□□□□ 0.57
PKP4Q99569 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.63■□□□□ 0.57
PKP4Q99569 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PKP4Q99569 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.63■□□□□ 0.57
PKP4Q99569 AC026271.3-201ENST00000571884 352 ntBASIC18.63■□□□□ 0.57
PKP4Q99569 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PKP4Q99569 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.63■□□□□ 0.57
PKP4Q99569 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PKP4Q99569 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.63■□□□□ 0.57
PKP4Q99569 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.63■□□□□ 0.57
PKP4Q99569 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PKP4Q99569 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PKP4Q99569 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PKP4Q99569 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.63■□□□□ 0.57
PKP4Q99569 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.62■□□□□ 0.57
PKP4Q99569 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PKP4Q99569 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.62■□□□□ 0.57
PKP4Q99569 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PKP4Q99569 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.62■□□□□ 0.57
PKP4Q99569 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PKP4Q99569 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PKP4Q99569 AC004951.3-201ENST00000418645 1148 ntBASIC18.62■□□□□ 0.57
PKP4Q99569 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.62■□□□□ 0.57
PKP4Q99569 TSPY23P-201ENST00000440136 739 ntBASIC18.62■□□□□ 0.57
PKP4Q99569 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PKP4Q99569 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.62■□□□□ 0.57
PKP4Q99569 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.62■□□□□ 0.57
PKP4Q99569 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.62■□□□□ 0.57
PKP4Q99569 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PKP4Q99569 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.62■□□□□ 0.57
PKP4Q99569 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PKP4Q99569 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.62■□□□□ 0.57
PKP4Q99569 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PKP4Q99569 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.62■□□□□ 0.57
PKP4Q99569 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.62■□□□□ 0.57
PKP4Q99569 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
PKP4Q99569 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PKP4Q99569 RNF165-205ENST00000588679 2904 ntBASIC18.62■□□□□ 0.57
PKP4Q99569 AIRN-201ENST00000601203 4374 ntBASIC18.61■□□□□ 0.57
PKP4Q99569 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.61■□□□□ 0.57
PKP4Q99569 AL161938.1-201ENST00000569833 2180 ntBASIC18.61■□□□□ 0.57
PKP4Q99569 IRX1P1-201ENST00000438849 1838 ntBASIC18.61■□□□□ 0.57
PKP4Q99569 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.61■□□□□ 0.57
PKP4Q99569 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PKP4Q99569 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.61■□□□□ 0.57
PKP4Q99569 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PKP4Q99569 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PKP4Q99569 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.61■□□□□ 0.57
PKP4Q99569 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PKP4Q99569 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PKP4Q99569 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PKP4Q99569 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PKP4Q99569 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PKP4Q99569 MESTP1-201ENST00000404287 994 ntBASIC18.61■□□□□ 0.57
PKP4Q99569 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.61■□□□□ 0.57
PKP4Q99569 TSPY21P-201ENST00000433481 731 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms